CN188430
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188430 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.525e-30 Identity = 76/151 (50.33%), Postives = 89/151 (58.94%), Query Frame = 1 Query: 76 RRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEE--KND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEISG 519 R NV DP S+D W D F + S A N R+DWKETP AHVF ADLPG+R G +L ISGER++E++ KND +WH VERSSGKF RRFRLP A+V+QV ASM+NGVLTVT AI ISG Sbjct: 5 RSGNVLDPMSVDFWADADPFGA-----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPISG 150
BLAST of CN188430 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.002e-25 Identity = 59/134 (44.03%), Postives = 85/134 (63.43%), Query Frame = 1 Query: 70 GGRRTNVFDPFSLDVWDPF-DGFLSSALTNAPSSARETSQF-ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 465 GG +P S+D+ +PF D +A APS+A + + A +DWKET AHVF AD+PG+R ++L+ISG+R++ EEK ++WHRVERSS +F+R RLP NA + V A+++NGVLT+T Sbjct: 26 GGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTIT 159
BLAST of CN188430 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.824e-25 Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 1 Query: 196 ARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 465 AR+DWKETP+ HV D+PGL+ R+L++SGER KE+E+K D WHRVERS GKF R+FRLP N ++ VKA +ENGVLT+T Sbjct: 67 ARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLT 156
BLAST of CN188430 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.824e-25 Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = 1 Query: 190 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 465 ++AR+DWKETP+ HV D+PGL+ R+L++SGER KE+++K D WHRVERS GKF R+F+LP N ++ VKA MENGVLT+T Sbjct: 73 SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLT 164
BLAST of CN188430 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23 Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = 1 Query: 172 RETS-QFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 462 R+TS + AR+DWKET + H D+PGL+ +L++SGER +E+E+K D+WHRVERS GKF R+F+LPDN +E VKA +ENGVLT+ Sbjct: 62 RDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTI 159
BLAST of CN188430 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22 Identity = 54/74 (72.97%), Postives = 59/74 (79.73%), Query Frame = 1 Query: 298 ILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEISG 519 ILQISGER+ E+E+KND WHRVERSSGKF+R FRLPDNAKV+QVKASMENGVLTVT AIEISG Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74
BLAST of CN188430 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.028e-21 Identity = 56/127 (44.09%), Postives = 80/127 (62.99%), Query Frame = 1 Query: 88 VFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLP-GLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 465 +FD + D W+PF F ++ +A A +TS FAN I+ +ET +A+VF+ADLP G++ G +L I+GERS +EEK + H +ERS F RF LPD+A V+ V+ASM+ G+LTVT Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADA-WLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGMLTVT 131
BLAST of CN188430 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.389e-18 Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 1 Query: 175 ETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQ--EEKN--DKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 462 + + + AR+DW+ET AH D+PG+R R+L+ISGER +E+ E+K D WHR ERS G+F R+ RLPDNA ++ + AS++NGVLTV Sbjct: 69 DVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTV 168
BLAST of CN188430 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.370e-18 Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 157 APSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXG-RILQISGER-----SKEQEEKND--KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 465 A ++A E + A AR DWKETP+AHV D+PG+R R+L++SGER ++E+E + D +WHR ER++G+F RRFR+P A V +V A +++GVLTVT Sbjct: 59 AAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVT 169
BLAST of CN188430 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.454e-16 Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 154 NAPSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 465 NAPS R+ A D KE P ++VF D+PGL+ +L ISGER +E+E++ K+ R+ER GKF+R+F LP+NA + + A ++GVLTVT Sbjct: 30 NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVT 135 The following BLAST results are available for this feature:
BLAST of CN188430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188430 ID=CN188430; Name=CN188430; organism=Citrus sinensis; type=EST; length=688bpback to top |