CN188428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHC_BOVIN (Malate dehydrogenase, cytoplasmic OS=Bos taurus GN=MDH1 PE=2 SV=3) HSP 1 Score: 176.792 bits (447), Expect = 3.885e-44 Identity = 92/154 (59.74%), Postives = 105/154 (68.18%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLI 460 P N L + APSIP + F+ LTRLDHNRA QI+ KL V DVKNVIIWGNHSS+QYPDVNHA V E V E +KDD+WL GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG+ SDG SY +P L+ Sbjct: 132 PANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGIPDDLL 285
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHC_XENTR (Malate dehydrogenase, cytoplasmic OS=Xenopus tropicalis GN=mdh1 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 5.073e-44 Identity = 92/154 (59.74%), Postives = 106/154 (68.83%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLI 460 P N L + APSIP + F+ LTRLDHNRA GQI+ KLNV DVKNVIIWGNHSS+QYPD +HATVN + E VK+D WL GEFITTVQQRGAA+IKARK CDH+RD GTP+G +VSMGV SDG SY +P L+ Sbjct: 132 PANTNCLTAMKSAPSIPKENFSCLTRLDHNRAKGQIALKLNVASDDVKNVIIWGNHSSTQYPDASHATVNLQGKDVGAFEAVKNDDWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPDGQFVSMGVISDGNSYGIPEDLM 285
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHC_MOUSE (Malate dehydrogenase, cytoplasmic OS=Mus musculus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 1.130e-43 Identity = 94/154 (61.04%), Postives = 104/154 (67.53%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLI 460 P N L + APSIP + F+ LTRLDHNRA QI+ KL V DVKNVIIWGNHSS+QYPDVNHA V E V E +KDD+WL GEFITTVQQRGAA+IKARK DHIRD GTPEG +VSMGV SDG SY VP L+ Sbjct: 132 PANTNCLTASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTADDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAIADHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLL 285
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHC_RAT (Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 174.866 bits (442), Expect = 1.476e-43 Identity = 94/154 (61.04%), Postives = 104/154 (67.53%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLI 460 P N L + APSIP + F+ LTRLDHNRA QI+ KL V DVKNVIIWGNHSS+QYPDVNHA V E V E +KDD+WL GEFITTVQQRGAA+IKARK DHIRD GTPEG +VSMGV SDG SY VP L+ Sbjct: 132 PANTNCLTASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTADDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAISDHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLL 285
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHC_FELCA (Malate dehydrogenase, cytoplasmic OS=Felis catus GN=MDH1 PE=2 SV=3) HSP 1 Score: 171.4 bits (433), Expect = 1.632e-42 Identity = 90/154 (58.44%), Postives = 105/154 (68.18%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLI 460 P N L + APSIP + F+ LTRLDHNRA QI+ KL V DVKNVIIWGNHSS+QYPDV+HA V E V + +KDD+WL GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG+ SDG+ Y VP L+ Sbjct: 132 PANTNCLTACKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVSHAKVKLHGKEVGVYDALKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNPYGVPDDLL 285
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHC_DICDI (Probable malate dehydrogenase 3 OS=Dictyostelium discoideum GN=mdhC PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 2.132e-42 Identity = 86/153 (56.21%), Postives = 101/153 (66.01%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + A IP + FT LTRLD NRA QI+ K V V DV NVIIWGNHSS+QYPD +N + G+ P+ +KD+ WL GEFI+TVQ+RGAA+I ARK DH+ DWVLGT EG +VSMGVYSDGSY VP GLI Sbjct: 133 PANTNALIAQVSANGIPKENFTCLTRLDQNRAKSQIALKAGVNVKDVHNVIIWGNHSSTQYPDYRCGYINLSTGKTPISTAIKDEKWLQGEFISTVQKRGAAVIAARKLSSAASAAKAITDHMHDWVLGTAEGEYVSMGVYSDGSYGVPEGLI 285
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHC_XENLA (Malate dehydrogenase, cytoplasmic OS=Xenopus laevis GN=mdh1 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.058e-41 Identity = 90/154 (58.44%), Postives = 103/154 (66.88%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLI 460 P N L + APSIP + F+ LTRLDHNRA QI+ KLNV DVKNVIIWGNHSS+QYPD +HA+V + E VK+D WL G FITTVQQRGAA+IKARK CDH+RD GTPEG +VSMGV SDG SY VP L+ Sbjct: 132 PANTNCLTALKSAPSIPKENFSCLTRLDHNRAKAQIALKLNVASDDVKNVIIWGNHSSTQYPDASHASVTLQGKDVGAFEAVKNDDWLKGGFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGQFVSMGVISDGNSYGVPEDLM 285
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_THEFY (Malate dehydrogenase OS=Thermobifida fusca (strain YX) GN=mdh PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.293e-39 Identity = 83/153 (54.25%), Postives = 100/153 (65.36%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP IPA FT++TRLDHNRAL Q++ KLNV VSD+K + IWGNHS++QYPD+ HA VN G V E V D+ WL FI TV +RGAAII+AR DH+ DWV GTPEG W S+ + SDGSY VP GL+ Sbjct: 133 PANTNALIAQAHAPDIPADRFTAMTRLDHNRALSQLAAKLNVSVSDIKKLTIWGNHSATQYPDIFHAEVN---GRSAV-EAVNDEEWLRDTFIPTVAKRGAAIIEARGASSAASAANAAIDHVYDWVNGTPEGDWTSVALPSDGSYGVPEGLV 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_NOCFA (Malate dehydrogenase OS=Nocardia farcinica GN=mdh PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.867e-38 Identity = 80/153 (52.29%), Postives = 100/153 (65.36%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I AP +PA+ FT++TRLDHNRA+ Q+++K +++ + +WGNHS++QYPD+ HATV AG +P RELV D+ WL +FI TVQQRG AII+AR DHI DWVLGTP G W SM V SDGSY VP GLI Sbjct: 137 PANTNAFIAMSNAPDVPAERFTAMTRLDHNRAIAQLAKKTGAPATEIHRIAVWGNHSATQYPDLTHATV---AG-RPARELV-DEQWLREDFIPTVQQRGTAIIQARGASSAASAASAAIDHIHDWVLGTPAGEWTSMAVPSDGSYGVPDGLI 284
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_DEIRA (Malate dehydrogenase OS=Deinococcus radiodurans GN=mdh PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 2.439e-38 Identity = 80/153 (52.29%), Postives = 99/153 (64.71%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI ++ AP + K FT++ RLDHNRAL Q++EK VSD+KNV IWGNHSS+QYPD++ ATVN KP E V D W ++I TV +RGAAII+AR DH+ DW LGT +G WVSMG+ SDGSY +P GLI Sbjct: 134 PANTNALIAQQNAPDLDPKCFTAMVRLDHNRALSQLAEKTGAAVSDIKNVTIWGNHSSTQYPDLSQATVN----GKPALEQV-DRTWYENDYIPTVAKRGAAIIEARGASSAASAASAAIDHMHDWALGTKDGEWVSMGIPSDGSYGIPEGLI 281 The following BLAST results are available for this feature:
BLAST of CN188428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188428 ID=CN188428; Name=CN188428; organism=Citrus sinensis; type=EST; length=461bpback to top |