CN188428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_MYCVP (Malate dehydrogenase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=mdh PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 8.401e-31 Identity = 67/153 (43.79%), Postives = 87/153 (56.86%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N L+ AP IPA FT+LTRLDHNRA+ + V V+++ + IWGNHS +QYPD+ HA V +G + D WL +FI TV +RG AII+AR DHI DWV GTP+G W S+ + S G+Y V GL+ Sbjct: 136 PANTNALVASAHAPDIPADRFTALTRLDHNRAVAATARHSGVPVTEISRMTIWGNHSPTQYPDIFHAVVGGRSG----ADYAADTRWLTDDFIPTVARRGTAIIEARGASSAASAANGAIDHIDDWVHGTPDGDWTSVALPSPGAYGVDEGLV 284
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_DIAST (Malate dehydrogenase OS=Diaphorobacter sp. (strain TPSY) GN=mdh PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 8.401e-31 Identity = 67/153 (43.79%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRA Q++ K +V D+K + +WGNHS + Y D ATV+ K V++ + D AW F+ TV +RGAAII AR DH+RDW LG+ +G WV+MGV S+G Y +PAG++ Sbjct: 135 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQLAAKGGFKVGDIKKLTVWGNHSPTMYADYRFATVD----GKSVKDAINDQAWNKDVFLPTVGKRGAAIIAARGLSSAASAANAAIDHMRDWALGS-KGEWVTMGVPSNGEYGIPAGIV 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_AZOSB (Malate dehydrogenase OS=Azoarcus sp. (strain BH72) GN=mdh PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.433e-30 Identity = 71/156 (45.51%), Postives = 93/156 (59.62%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPS---IPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I KE A +PAK FT + RLDHNRAL Q++ K +VS +KN+++WGNHS + Y D N + V++L+ D AW F+ TV +RGAAII+AR DHIRDWVLG+ G WV+MG+ SDGSY +P G+I Sbjct: 133 PCNTNAYIAKEVAQKYGRVPAKNFTGMLRLDHNRALSQLAGKSGREVSSLKNLVVWGNHSPTMYADYRFVKSNGDS----VKDLINDAAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGS-NGEWVTMGIPSDGSYGIPEGVI 283
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_STRMK (Malate dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=mdh PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.444e-30 Identity = 67/153 (43.79%), Postives = 91/153 (59.48%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP + + FT++ RLDHNRAL Q+S KL V ++ +++WGNHS + YPD AT + A+ + + + D W FI TV +RGAAII+AR DH+RDWVLG+ G WV+MGV SDGSY +P G+I Sbjct: 134 PANTNAYIAMKSAPDLKPENFTAMLRLDHNRALSQLSTKLGKPVGGMEKLVVWGNHSPTMYPDYRFATADGAS----IADAINDQEWNANTFIPTVGKRGAAIIEARGSSSAASAANAAIDHVRDWVLGS-NGKWVTMGVPSDGSYGIPEGVI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_STRM5 (Malate dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=mdh PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.444e-30 Identity = 67/153 (43.79%), Postives = 91/153 (59.48%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP + + FT++ RLDHNRAL Q+S KL V ++ +++WGNHS + YPD AT + A+ + + + D W FI TV +RGAAII+AR DH+RDWVLG+ G WV+MGV SDGSY +P G+I Sbjct: 134 PANTNAYIAMKSAPDLKPENFTAMLRLDHNRALSQLSAKLGKPVGGMEKLVVWGNHSPTMYPDYRFATADGAS----IADAINDQEWNANTFIPTVGKRGAAIIEARGSSSAASAANAAIDHVRDWVLGS-NGKWVTMGVPSDGSYGIPEGVI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_DELAS (Malate dehydrogenase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=mdh PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.444e-30 Identity = 68/153 (44.44%), Postives = 91/153 (59.48%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRA Q++ K +V D++ + +WGNHS + Y D ATVN GE V+ + D AW F+ TV +RGAAII AR DH+RDW LG+ G WV+MGV S+G Y +PAG++ Sbjct: 135 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQLAAKAGFKVGDIRKLTVWGNHSPTMYADYRFATVN---GES-VKAKINDQAWNKDVFLPTVGKRGAAIIAARGLSSAASAANAAIDHMRDWALGS-GGEWVTMGVPSNGEYGIPAGIV 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_BURXL (Malate dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=mdh PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.444e-30 Identity = 67/153 (43.79%), Postives = 91/153 (59.48%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +P K FT++ RLDHNRAL Q++ K V+ ++ + +WGNHS + YPD AT A + + +L+ D+ W FI TV +RGAAII+AR DH+RDWVLGT G WV+MG+ SDGSY +P +I Sbjct: 133 PANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVASIEKLAVWGNHSPTMYPDFRVAT----AEGQDLTKLINDEEWNRNTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDII 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_CHRVO (Malate dehydrogenase OS=Chromobacterium violaceum GN=mdh PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.170e-30 Identity = 67/153 (43.79%), Postives = 91/153 (59.48%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP + K FT++ RLDHNRAL QI+ K V+ ++ + +WGNHS + Y D AT++ + V+ ++ DD W F+ TV +RGAAII+AR DHIRDWVLGT G WV+MGV SDGSY +P G++ Sbjct: 132 PANTNAWIAMKSAPDLDPKNFTAMLRLDHNRALSQIAAKTGKPVASIEKLAVWGNHSPTMYADYRFATID----GQSVKAMINDDVWNRDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGT-NGKWVTMGVPSDGSYGIPEGVM 279
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH1_RHOFD (Malate dehydrogenase 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mdh1 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.170e-30 Identity = 66/149 (44.30%), Postives = 89/149 (59.73%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVP 448 P N I + AP +PAK FT++ RLDHNRAL Q++ K V+D++ + +WGNHS + Y D AT+N GE V++++ D W F+ TV +RGAAII AR DH+RDW LGT G WV+MG+ SDG Y +P Sbjct: 135 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLASKTGKAVADIEKMAVWGNHSPTMYADYRFATIN---GES-VKDMINDQDWNANTFLPTVGKRGAAIIAARGVSSAASAANAAIDHMRDWALGT-NGKWVTMGIPSDGQYGIP 278
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH2_BURTA (Malate dehydrogenase 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh2 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 5.446e-30 Identity = 61/153 (39.87%), Postives = 91/153 (59.48%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N IL+ FAP +P +++ RLDHNRA+ ++++ NV V + ++++WGNHS + +PD HA + G + V++L+ D+ W FI V QRG AII+AR D +RDW+ G+ +G WVSM V SDGSY + GL+ Sbjct: 133 PANTNASILRRFAPDLPDDAISAMIRLDHNRAVSMLAQRCNVDVDSIADMVVWGNHSPTMFPDYRHARI----GRRLVKDLINDENWYRESFIPKVAQRGTAIIEARGASSAASAANAAIDQMRDWIFGS-DGRWVSMSVPSDGSYGIAPGLM 280 The following BLAST results are available for this feature:
BLAST of CN188428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188428 ID=CN188428; Name=CN188428; organism=Citrus sinensis; type=EST; length=461bpback to top |