CN188428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_METCA (Malate dehydrogenase OS=Methylococcus capsulatus GN=mdh PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 7.112e-30 Identity = 68/153 (44.44%), Postives = 88/153 (57.52%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP + F+++TRLDHNRA ++ V+++ V+IWGNHS +QYPD++HA V KP LV D AW FI TVQQRGA++I R DH+R W LGTP+ WVSM V SDGSY + GL+ Sbjct: 132 PANTNALIAQRNAPDLAPGCFSAMTRLDHNRATSLLARHCGCNVAEISRVVIWGNHSPTQYPDLHHARVK----GKPALSLV-DPAWYVETFIPTVQQRGASVIAIRGKSSAASAANAALDHMRSWFLGTPKDDWVSMTVSSDGSYGIAEGLM 279
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_VEREI (Malate dehydrogenase OS=Verminephrobacter eiseniae (strain EF01-2) GN=mdh PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.584e-29 Identity = 64/153 (41.83%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +P K FT++ RLDHNRA+ QI+ K V+D++ + +WGNHS + Y D AT AG + V ++ D AW F+ TV +RGAAII+AR DH+RDW LG+ G WV+MG+ SDG Y +P ++ Sbjct: 135 PANTNAFIAMQSAPDLPRKNFTAMLRLDHNRAVSQIAAKTGQAVADIEKLTVWGNHSPTMYADYRFAT----AGGQSVAAMINDQAWNANVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGS-NGRWVTMGIASDGQYGIPKDIV 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_SYNFM (Malate dehydrogenase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=mdh PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.584e-29 Identity = 65/151 (43.05%), Postives = 89/151 (58.94%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAG 454 P N I + AP +P FT++ RLDHNRA Q++ + V+ V+ +I+WGNHS + YPD+ TV+ +P +LV D+AW E+I V +RGAAII+AR DH+ DW LGT G WV+MG+ SDGSY +P G Sbjct: 135 PANTNAWIAMKSAPDLPKGNFTAMLRLDHNRAKSQLATRTGKPVASVEKMIVWGNHSPTMYPDIRFCTVD----GQPAVKLVNDEAWYRNEYIPKVGKRGAAIIEARGLSSAASAANAAIDHMHDWALGT-NGKWVTMGLPSDGSYGIPEG 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_LEPCP (Malate dehydrogenase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=mdh PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.584e-29 Identity = 65/150 (43.33%), Postives = 87/150 (58.00%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPA 451 P N I + AP +PAK FT++ RLDHNRA QI+ K V+ ++ + +WGNHS + Y D AT+ G + V++++ DD W F+ TV +RGAAII AR DH+RDW LGT G WV+MGV S G Y +PA Sbjct: 135 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQIAAKTGKPVASIEKLAVWGNHSPTMYADYRFATI----GGESVKDMINDDVWNRDVFLPTVGKRGAAIIAARGVSSAASAANAAIDHMRDWALGT-NGAWVTMGVPSKGEYGIPA 279
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_RALEH (Malate dehydrogenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=mdh PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.069e-29 Identity = 66/150 (44.00%), Postives = 91/150 (60.67%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPA 451 P N I + AP++P + FT++ RLDHNRAL QI+ K VS ++ + +WGNHS + Y D +ATV+ K V++L+ D W N F+ TV +RGAAII+AR DH+RDWVLGT G V+MG+ S+G Y +PA Sbjct: 133 PANTNAYIAMKSAPNLPRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYATVD----GKSVKDLINDPVWNNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKVVTMGIPSNGEYGIPA 277
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_ACIAC (Malate dehydrogenase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=mdh PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.703e-29 Identity = 64/153 (41.83%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRA QI+ K +V +++ + +WGNHS + Y D AT+ G K V++ + D W F+ TV +RGAAII+AR DH+RDW LG+ G WV+MGV S G Y +P G++ Sbjct: 135 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQIAAKTGGKVGEIEKLTVWGNHSPTMYADYRFATI----GGKSVKDAINDQVWNADVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGS-NGKWVTMGVPSKGEYGIPEGIV 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_XANOR (Malate dehydrogenase OS=Xanthomonas oryzae pv. oryzae GN=mdh PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 4.610e-29 Identity = 66/153 (43.14%), Postives = 90/153 (58.82%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP + K FT++ RLDHNRAL Q++ KL V ++ +++WGNHS + YPD AT + A+ + + + D W FI TV +RGAAII+AR DH+RDWVLG+ G WV+MGV SDGSY + G+I Sbjct: 134 PANTNAYIAMKSAPDLNPKNFTAMLRLDHNRALSQLALKLGKPVGGIEKLVVWGNHSPTMYPDYRFATSDGAS----IGDAINDQEWNASTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGVPSDGSYGISEGVI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_XANOM (Malate dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=mdh PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 4.610e-29 Identity = 66/153 (43.14%), Postives = 90/153 (58.82%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP + K FT++ RLDHNRAL Q++ KL V ++ +++WGNHS + YPD AT + A+ + + + D W FI TV +RGAAII+AR DH+RDWVLG+ G WV+MGV SDGSY + G+I Sbjct: 134 PANTNAYIAMKSAPDLNPKNFTAMLRLDHNRALSQLALKLGKPVGGIEKLVVWGNHSPTMYPDYRFATSDGAS----IGDAINDQEWNASTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGVPSDGSYGISEGVI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_METPP (Malate dehydrogenase OS=Methylibium petroleiphilum (strain PM1) GN=mdh PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 4.610e-29 Identity = 64/149 (42.95%), Postives = 87/149 (58.39%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVP 448 P N I + AP +P K FT++ RLDHNRA QI+ K VS +K + +WGNHS + Y D AT++ A+ V++++ D W F+ TV +RGAAII+AR DH+RDW LGT G WV+MGV S+G Y +P Sbjct: 135 PANTNAYIAMKAAPDLPRKNFTAMLRLDHNRAASQIAAKTGKPVSSIKQLAVWGNHSPTMYADYRFATIDGAS----VKDMINDQVWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGAWVTMGVPSNGEYGIP 278
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_POLNA (Malate dehydrogenase OS=Polaromonas naphthalenivorans (strain CJ2) GN=mdh PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 6.021e-29 Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPA 451 P N I + AP +PAK FT++ RLDHNRA QI+ K V+D++ + +WGNHS + Y D AT+ G + V +++ D W F+ TV +RGAAII+AR DH+RDW LGT G WV+MG+ S G Y +PA Sbjct: 135 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQIAAKTGKAVADIEKLTVWGNHSPTMYADYRFATI----GGESVAQMINDQEWNANVFLPTVGKRGAAIIEARGSSSAASAANAAIDHMRDWALGT-NGKWVTMGIPSGGEYGIPA 279 The following BLAST results are available for this feature:
BLAST of CN188428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188428 ID=CN188428; Name=CN188428; organism=Citrus sinensis; type=EST; length=461bpback to top |