CN188428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_LEPBL (Malate dehydrogenase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=mdh PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 8.997e-25 Identity = 63/153 (41.18%), Postives = 84/153 (54.90%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI A IP+ + ++T+LD NRA Q++ K V V +V ++ IWGNHSS+QYPD +A ++ KPV +++ D WL G+FI VQQRGA IIKAR D +R + T G S + SDGSY GLI Sbjct: 132 PCNTNCLIAMNNAKGIPSDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSSTQYPDFYNAKISG----KPVTDVISDHEWLKGDFIKNVQQRGAEIIKARGASSAASAANGVVDTVRAIITPTASGDAFSAAIASDGSYGTEKGLI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_LEPBJ (Malate dehydrogenase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=mdh PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 8.997e-25 Identity = 63/153 (41.18%), Postives = 84/153 (54.90%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI A IP+ + ++T+LD NRA Q++ K V V +V ++ IWGNHSS+QYPD +A ++ KPV +++ D WL G+FI VQQRGA IIKAR D +R + T G S + SDGSY GLI Sbjct: 132 PCNTNCLIAMNNAKGIPSDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSSTQYPDFYNAKISG----KPVTDVISDHEWLKGDFIKNVQQRGAEIIKARGASSAASAANGVVDTVRAIITPTASGDAFSAAIASDGSYGTEKGLI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHP_MEDSA (Malate dehydrogenase [NADP], chloroplastic OS=Medicago sativa GN=MDH1 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.175e-24 Identity = 62/145 (42.76%), Postives = 83/145 (57.24%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS 436 P N LI + AP+IPAK F +LTRLD NRA Q++ K V V N+ IWGNHS++Q PD +A ++ PV+E++KD WL EF VQ+RG A+I+ D IR ++ TPEG W S GVY+ G+ Sbjct: 222 PCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIDGL----PVKEVIKDHKWLEEEFTEKVQKRGGALIQKWGRSSAASTSVSIVDAIRSLIIPTPEGDWFSTGVYTTGN 362
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHP2_SORBI (Malate dehydrogenase [NADP] 2, chloroplastic OS=Sorghum bicolor PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.004e-24 Identity = 62/145 (42.76%), Postives = 82/145 (56.55%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS 436 P N LI + P+IPAK F +LTRLD NRA QI+ K V V NV IWGNHS++Q PD +A ++ +PV+E+++D WL EF TVQ+RG +I+ D I+ V TPEG W S GVY+ G+ Sbjct: 217 PCNTNALICLKNTPNIPAKNFHALTRLDENRAKCQIALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKID----GRPVKEIIQDTKWLEEEFTMTVQKRGGVLIQKWGRSSAASTAVSIVDAIKSLVTPTPEGEWFSTGVYTTGN 357
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHP_PEA (Malate dehydrogenase [NADP], chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 2.618e-24 Identity = 61/145 (42.07%), Postives = 83/145 (57.24%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS 436 P N LI + AP+IPAK F +LTRLD NRA Q++ K V V N+ IWGNHS++Q PD +A ++ PV+E++KD+ WL EF VQ+RG +I+ D IR + TPEG W S GVY++G+ Sbjct: 226 PCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIDGL----PVKEVIKDNKWLEEEFTEKVQKRGGVLIQKWGRSSAASTSVSIVDAIRSLITPTPEGDWFSSGVYTNGN 366
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_RUBXD (Malate dehydrogenase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=mdh PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 7.616e-24 Identity = 61/153 (39.87%), Postives = 91/153 (59.48%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP +P + F+++TRLD NRA+ +++KL V V DV+++++WGNHS + +PD+ +A V G++ V +LV+ + W E+I V +RGA II+AR DH+RDW+LG + SM V S G Y V GL+ Sbjct: 130 PANTNCLIAMNNAPDVPRERFSAMTRLDENRAVSMLAQKLGVGVEDVRDLVVWGNHSPTMFPDLFNARVK---GQRAV-DLVEME-WYENEYIPRVGKRGAEIIEARGASSAASAANAAIDHVRDWMLGA--DSLHSMAVASSGQYGVEEGLV 275
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_LEPIN (Malate dehydrogenase OS=Leptospira interrogans GN=mdh PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 7.616e-24 Identity = 63/153 (41.18%), Postives = 80/153 (52.29%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI A I + ++T+LD NRA Q++ K V V +V ++ IWGNHS++QYPD NT KPV +++ D WL G+FI VQQRGA IIKAR D +R + T G S V SDGSY GLI Sbjct: 132 PCNTNCLIAMNNAKGISQDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSATQYPDF----YNTKISGKPVTDVISDHEWLKGDFIKNVQQRGAEIIKARGASSAASAANGVVDTVRGIITPTAPGDCFSAAVVSDGSYGAEKGLI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_LEPIC (Malate dehydrogenase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=mdh PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 7.616e-24 Identity = 63/153 (41.18%), Postives = 80/153 (52.29%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI A I + ++T+LD NRA Q++ K V V +V ++ IWGNHS++QYPD NT KPV +++ D WL G+FI VQQRGA IIKAR D +R + T G S V SDGSY GLI Sbjct: 132 PCNTNCLIAMNNAKGISQDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSATQYPDF----YNTKISGKPVTDVISDHEWLKGDFIKNVQQRGAEIIKARGASSAASAANGVVDTVRGIITPTAPGDCFSAAVVSDGSYGAEKGLI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHP_FLABI (Malate dehydrogenase [NADP], chloroplastic OS=Flaveria bidentis PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.299e-23 Identity = 62/145 (42.76%), Postives = 79/145 (54.48%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS 436 P N LI + AP+IP K F +LTRLD NRA Q++ K V V NV IWGNHS++Q PD +A ++ PV E+++D WL EF VQ RG +IK D IR V TPEG W S GVY++G+ Sbjct: 238 PCNTNALICLKNAPNIPPKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIHGI----PVTEVIRDRKWLEDEFTNMVQTRGGVLIKKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFSTGVYTNGN 378
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH2_RHOFD (Malate dehydrogenase 2 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mdh2 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.299e-23 Identity = 58/138 (42.03%), Postives = 79/138 (57.25%), Query Frame = 2 Query: 47 IPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 IPA+ F +L RLDHNRAL Q++ K V VK + +WGNHS + Y D T++ + V ++ + AW + + TV +RG AI+ AR D +RDW LGT G W +MGV SDG+Y VPAGL+ Sbjct: 151 IPARNFAALLRLDHNRALAQLALKTGRPVGGVKRLAVWGNHSPTVYADDRFTTIDGDS----VPAIIDNIAWHHDTLVRTVDKRGEAILAARGLYAEASAASAAIDQMRDWWLGT-RGEWTTMGVVSDGAYGVPAGLV 283 The following BLAST results are available for this feature:
BLAST of CN188428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188428 ID=CN188428; Name=CN188428; organism=Citrus sinensis; type=EST; length=461bpback to top |