CN188428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_CHLFF (Malate dehydrogenase OS=Chlamydophila felis (strain Fe/C-56) GN=mdh PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.817e-17 Identity = 51/154 (33.12%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSD-GSYNVPAGLI 460 P N I AP + + F S+ RLD NR ++ + V + +V NV+IWGNHS+ Q PD + ++ KP E++ D WL + ++Q RG+A+I+AR + R + EG W S GV SD Y +P LI Sbjct: 134 PVNTNCWIAMSRAPKLNRRNFHSMLRLDQNRMQAMLAHRAQVPLDEVTNVVIWGNHSAKQVPDFTQSLIS----GKPAVEVISDRDWLENIMLPSIQNRGSAVIEARGKSSAGSAARALAEAARS-IFVPKEGEWFSTGVCSDYNPYGIPEDLI 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_CHLMU (Malate dehydrogenase OS=Chlamydia muridarum GN=mdh PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.178e-16 Identity = 50/154 (32.47%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLI 460 P N I AP + K F ++ RLD NR ++ + V +S V V++WGNHS+ Q PD A ++ +P+ E + D WL + +VQ RG+A+I+AR + R + EG W S GV SD + Y +P +I Sbjct: 133 PVNTNCWIAMNHAPRLLRKNFHAMLRLDQNRMHSMLAHRAEVPLSAVSQVVVWGNHSAKQVPDFTQALIH----GRPIVETIADRDWLENIMVPSVQSRGSAVIEARGKSSAASAARALAEAARS-IYQPKEGEWFSSGVCSDNNPYGLPEDII 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_CHLCV (Malate dehydrogenase OS=Chlamydophila caviae GN=mdh PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.178e-16 Identity = 51/154 (33.12%), Postives = 74/154 (48.05%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSD-GSYNVPAGLI 460 P N I AP + + F S+ RLD NR ++ + V + +V NV++WGNHS+ Q PD A ++ KP E++ D WL ++Q RG+A+I+AR + R L +G W S GV SD Y +P LI Sbjct: 136 PVNTNCWIAMNKAPKLNRRNFHSMLRLDQNRMHTMLAHRAEVPLDEVTNVVVWGNHSAKQVPDFTQALIS----GKPAVEVISDRDWLENIMFPSIQNRGSAVIEARGKSSAGSAARALAEAARSIFL-PKDGEWFSSGVCSDYNPYGIPDDLI 284
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_CHLAB (Malate dehydrogenase OS=Chlamydophila abortus GN=mdh PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.624e-16 Identity = 51/154 (33.12%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSD-GSYNVPAGLI 460 P N I AP + + F S+ RLD NR ++ + V + +V +V+IWGNHS+ Q PD A ++ KP E++ D WL + ++Q RG+A+I+AR + R L +G W S GV SD Y +P LI Sbjct: 136 PVNTNCWIAMSQAPRLNRRNFHSMLRLDQNRMHTMLAHRAEVPLDEVSHVVIWGNHSAKQVPDFTQALIS----GKPAVEVIGDRDWLENIMLPSIQNRGSAVIEARGKSSAASAARALAEAARSIFL-PKDGEWFSTGVCSDYNPYGIPEDLI 284
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_CHLPN (Malate dehydrogenase OS=Chlamydia pneumoniae GN=mdh PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 4.476e-16 Identity = 50/154 (32.47%), Postives = 73/154 (47.40%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSD-GSYNVPAGLI 460 P N I + AP + K F ++ RLD NR ++ + V + +V V+IWGNHS+ Q PD A ++ KP E++ D WL + +VQ RG+A+I+AR + R + W S GV SD Y +P LI Sbjct: 134 PVNTNCWIAMKHAPRLHRKNFHAMLRLDQNRMHSMLAHRAEVPLEEVSRVVIWGNHSAKQVPDFTQARIS----GKPAAEVIGDRDWLENILVHSVQNRGSAVIEARGKSSAASASRALAEAARS-IFCPKSDEWFSSGVCSDHNPYGIPEDLI 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH1B_BRAFL (Putative malate dehydrogenase 1B OS=Branchiostoma floridae GN=MDH1B PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 4.948e-15 Identity = 46/154 (29.87%), Postives = 76/154 (49.35%), Query Frame = 2 Query: 23 ILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG--------EKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 IL + PSIP + ++ ++ +A ++++L V + V +VI+WGN + Y DV+ A V+ G V E+V D+ WL GEF+ +Q R I + + + W G+PEG S+ V S+G YN+P G++ Sbjct: 266 ILIDHTPSIPRQNIAAVAQVKERQAKSLLAKRLTVNSAGVCDVIVWGNVGGTTYTDVSRARVHGYDGAIWGPPSYSCSVSEMVHDNKWLEGEFLEQLQSRSHTIQDSLQHSADLSMAAAISSTLSYWWNGSPEGQLFSLAVCSEGFYNIPEGVV 419
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH1B_DANRE (Putative malate dehydrogenase 1B OS=Danio rerio GN=mdh1b PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.490e-11 Identity = 45/154 (29.22%), Postives = 72/154 (46.75%), Query Frame = 2 Query: 23 ILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG--------EKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 +L E APSI ++ F ++T A Q+++KL+V+ SD+ NVI+WGN S S + D+ A V G + V E++ D WL +F + + + A I ++ W S+GV S G + +PAGL+ Sbjct: 244 LLIENAPSIDSRNFVAMTTQLEYEARTQLAQKLSVKTSDITNVIVWGNISGSFHIDLQRAKVFRYDGAIRGPDGFSQHVMEMIYDWKWLKTDFRSLLHKHRATISSKTNKATAISTTNAILAILKAWNNAESPEEVFSLGVLSTGQFGIPAGLV 397 The following BLAST results are available for this feature:
BLAST of CN188428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188428 ID=CN188428; Name=CN188428; organism=Citrus sinensis; type=EST; length=461bpback to top |