CN188428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_RHOOB (Malate dehydrogenase OS=Rhodococcus opacus (strain B4) GN=mdh PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 6.641e-36 Identity = 72/153 (47.06%), Postives = 94/153 (61.44%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N L+ AP +PA+ FT+LTRLDHNRA+ Q++ V D+ V IWGNHSS+QYPD+ HA V G++ ++ D WL G+FI TV RG+AII+AR DH+ DWVLGTPEG W S+ + S G+Y VP GL+ Sbjct: 135 PANTNALVAANNAPDVPAERFTALTRLDHNRAIAQLARHSGAAVRDISRVTIWGNHSSTQYPDIFHARV----GDRSGADIAADREWLTGDFIPTVANRGSAIIEARGTSSAASAANAAIDHVHDWVLGTPEGDWTSVALPSTGAYGVPEGLV 283
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_MYCA1 (Malate dehydrogenase OS=Mycobacterium avium (strain 104) GN=mdh PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 8.674e-36 Identity = 76/153 (49.67%), Postives = 95/153 (62.09%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP + F++LTRLDHNRA+ Q+++K +V+D+ + IWGNHS++QYPD+ HA V K E+V D W+ +FI TV +RGAAII AR D RDW+LGTP G WVSM V SDGSY VP GLI Sbjct: 133 PANTNALIAMSNAPDIPRERFSALTRLDHNRAISQLAKKTGAKVTDITKMTIWGNHSATQYPDIFHAEVKG----KNAAEVVGDQNWIENDFIPTVAKRGAAIIDARGASSAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_PSYCK (Malate dehydrogenase OS=Psychrobacter cryohalolentis (strain K5) GN=mdh PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.480e-35 Identity = 77/153 (50.33%), Postives = 98/153 (64.05%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N +I + AP + + FT++TRLDHNRA+ Q++ K + V+DVK +IIWGNHSS+QYPD+ +TVN KP +LV D AW G +I VQQRGAAIIKAR H+R WV+GT E WVSMGVYS+G Y + GLI Sbjct: 134 PANTNAVIAQRNAPDLDPRNFTAMTRLDHNRAMAQLAGKTDSTVNDVKKMIIWGNHSSTQYPDLTASTVN----GKPALDLV-DRAWYEGTYIPEVQQRGAAIIKARGASSAASAANAAIAHVRTWVMGTDENDWVSMGVYSNGEYGIAKGLI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_RHOSR (Malate dehydrogenase OS=Rhodococcus sp. (strain RHA1) GN=mdh PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.524e-35 Identity = 72/153 (47.06%), Postives = 93/153 (60.78%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N L+ AP IPA+ FT+LTRLDHNRA+ Q++ V D++ V IWGNHSS+QYPD+ HA V G++ E D WL G+FI TV RG+AII+AR DH+ DWVLGTP+ W S+ + S G+Y VP GL+ Sbjct: 135 PANTNALVAANNAPDIPAERFTALTRLDHNRAIAQLARHSGAAVKDIRRVAIWGNHSSTQYPDIFHARV----GDRSGAEFAADREWLTGDFIPTVANRGSAIIEARGASSAASAANAAIDHVHDWVLGTPDDDWTSVALPSTGAYGVPEGLV 283
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_ALHEH (Malate dehydrogenase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mdh PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.524e-35 Identity = 76/153 (49.67%), Postives = 96/153 (62.75%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP + + FT++TRLDHNRA+ Q++ K +++KN+IIWGNHS++QYPD++ V A LV+ D W +FI TVQQRGAAIIKAR DHIRDWVLGTPEG W SM V SDGSY + G+I Sbjct: 132 PANTNSLIAQRNAPDLDPRNFTAMTRLDHNRAVAQLANKTGAHNTEIKNMIIWGNHSATQYPDISKTKVKGEAAPG----LVERD-WYENDFIPTVQQRGAAIIKARGASSAASAASSAIDHIRDWVLGTPEGEWTSMAVPSDGSYGIEKGII 279
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHC_ECHGR (Malate dehydrogenase, cytoplasmic OS=Echinococcus granulosus GN=MDH PE=2 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 2.524e-35 Identity = 71/146 (48.63%), Postives = 92/146 (63.01%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSY 439 P N LI+ ++APSIP + FT+LTRLDHNRA+ Q++ K V + VKNV IWGNHS+ Q+PD++HA V + P +EL+ D+ W+ FI VQ RGAA+I RK D +RDW GT EG WVSM VYS G + Sbjct: 132 PANTNCLIMSKYAPSIPKENFTALTRLDHNRAIYQVAAKAGVPNTCVKNVCIWGNHSNKQFPDLSHAVVTKDGKQHPAKELINDEKWVKEVFIPCVQNRGAAVIGLRKLSRAASAAKAIVDQMRDWWFGTKEGEWVSMSVYSTGDH 277
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_NITEU (Malate dehydrogenase OS=Nitrosomonas europaea GN=mdh PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.296e-35 Identity = 67/153 (43.79%), Postives = 98/153 (64.05%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP + + F+ + RLDHNRAL Q++ KLN VS ++ +I+WGNHSS+Q+PD++HA ++ + V +L+KD W+ FI TVQ RGA +I+AR DH+RDW+ GT + W++MG+ SDGSY +P G+I Sbjct: 132 PANTNTLITMKNAPDLSPENFSGMLRLDHNRALSQVAMKLNQPVSHIRKMIVWGNHSSTQFPDLSHAEID----HQKVIDLIKDQTWVENSFIPTVQNRGAVVIEARGLSSAASAANAIIDHMRDWIFGTRDDDWITMGILSDGSYKIPKGVI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_BORPE (Malate dehydrogenase OS=Bordetella pertussis GN=mdh PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.296e-35 Identity = 74/153 (48.37%), Postives = 98/153 (64.05%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRAL Q+S K +V+D++ +I+WGNHS + YPD ATV G + + +L+ DDAW FI TV +RGAAII+AR DH+RDWVLG+ G WV+MG+ SDGSY +P G+I Sbjct: 135 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLSAKSGKRVADIEKLIVWGNHSPTMYPDFRFATV----GGQGLTQLINDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGII 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_BORPA (Malate dehydrogenase OS=Bordetella parapertussis GN=mdh PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.296e-35 Identity = 74/153 (48.37%), Postives = 98/153 (64.05%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRAL Q+S K +V+D++ +I+WGNHS + YPD ATV G + + +L+ DDAW FI TV +RGAAII+AR DH+RDWVLG+ G WV+MG+ SDGSY +P G+I Sbjct: 135 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLSAKSGKRVADIEKLIVWGNHSPTMYPDFRFATV----GGQGLTQLINDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGII 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_BORBR (Malate dehydrogenase OS=Bordetella bronchiseptica GN=mdh PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.296e-35 Identity = 74/153 (48.37%), Postives = 98/153 (64.05%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRAL Q+S K +V+D++ +I+WGNHS + YPD ATV G + + +L+ DDAW FI TV +RGAAII+AR DH+RDWVLG+ G WV+MG+ SDGSY +P G+I Sbjct: 135 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLSAKSGKRVADIEKLIVWGNHSPTMYPDFRFATV----GGQGLTQLINDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGII 282 The following BLAST results are available for this feature:
BLAST of CN188428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188428 ID=CN188428; Name=CN188428; organism=Citrus sinensis; type=EST; length=461bpback to top |