CN188428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHA_DICDI (Probable malate dehydrogenase 1 OS=Dictyostelium discoideum GN=mdhA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 4.305e-35 Identity = 77/156 (49.36%), Postives = 91/156 (58.33%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGE---KPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N L A +P F++LTRLD NRA ISEK+ V +V NVIIWGNHS +Q PDVNH + +P+ V DD WLN +FI VQ RGA +I ARK H+RDW+LGT +G VSM VYSDGSYNVP GLI Sbjct: 189 PANTNALTALMKASDLPTSNFSALTRLDQNRAQSMISEKVGTNVDNVHNVIIWGNHSQTQVPDVNHGYILNYPNRGLIEPIPSSVNDDKWLNEQFIPLVQNRGATVIAARKLSSAASAANAIVGHVRDWLLGTKDGEHVSMAVYSDGSYNVPKGLI 344
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_MYCMM (Malate dehydrogenase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=mdh PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 7.343e-35 Identity = 77/153 (50.33%), Postives = 93/153 (60.78%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP + F++LTRLDHNRA+ Q++ K V V+D+K + IWGNHS++QYPD+ HA V K E+V D AW+ FI TV +RGAAII AR D R W+LGTP WVSM V SDGSY VP GLI Sbjct: 133 PANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGVAVTDIKKMTIWGNHSATQYPDLFHAEVK----GKNAAEVVNDQAWIEEYFIPTVAKRGAAIIDARGASSAASAASATVDAARSWLLGTPADDWVSMAVLSDGSYGVPEGLI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_FRASC (Malate dehydrogenase OS=Frankia sp. (strain CcI3) GN=mdh PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 9.590e-35 Identity = 73/153 (47.71%), Postives = 94/153 (61.44%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP +PA+ FT++TRLDHNRA+ Q+++KL V +++K + IWGNHS++QYPD+ HA V +G E V D AW+ EFI V +RGA II+ R DHI WV GTP G W S + SDGSY VP GLI Sbjct: 133 PANTNALIAQTHAPDVPAERFTAMTRLDHNRAIAQLAKKLGVPSAEIKKITIWGNHSATQYPDIFHAEVGGRSG----AEAVGDQAWIADEFIPRVAKRGAEIIEVRGASSAASAASAAIDHIFTWVNGTPAGDWTSAAIPSDGSYGVPEGLI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_AKKM8 (Malate dehydrogenase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=mdh PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 9.590e-35 Identity = 76/153 (49.67%), Postives = 94/153 (61.44%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI A +P+ F ++TRLD NRA Q++EK V V++V N+ IWGNHSS+QYPD +A + G KPV E++KD WL G+FITTVQQRGAAIIKAR D +R TPEG W S+ V SDGSY + GLI Sbjct: 132 PCNTNALIAMHNASGVPSDRFFAMTRLDENRAKSQLAEKAGVHVTEVTNMAIWGNHSSTQYPDFTNARI----GGKPVTEVIKDTEWLKGDFITTVQQRGAAIIKARGASSAASAASAAVDTVRSLATQTPEGDWYSVAVCSDGSYGIEKGLI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_BORPD (Malate dehydrogenase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=mdh PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.636e-34 Identity = 72/153 (47.06%), Postives = 97/153 (63.40%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRAL Q++ K V+D++ +++WGNHS + YPD ATV G + + +L+ DDAW FI TV +RGAAII+AR DH+RDWVLG+ G WV+MG+ SDGSY +P G+I Sbjct: 135 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLAAKSGKAVADIEKLVVWGNHSPTMYPDYRFATV----GGQSLAKLINDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGII 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_MYCUA (Malate dehydrogenase OS=Mycobacterium ulcerans (strain Agy99) GN=mdh PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.136e-34 Identity = 76/153 (49.67%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP + F++LTRLDHNRA+ Q++ K V V+D+K + IWGNHS++QYPD+ HA V K E+V D AW+ FI TV +RGA II AR D R W+LGTP WVSM V SDGSY VP GLI Sbjct: 133 PANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGVAVTDIKKMTIWGNHSATQYPDLFHAEVK----GKNAAEVVNDQAWIEEYFIPTVAKRGATIIDARGASSAASAASASVDAARSWLLGTPADDWVSMAVLSDGSYGVPEGLI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_FRAAA (Malate dehydrogenase OS=Frankia alni (strain ACN14a) GN=mdh PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.136e-34 Identity = 71/153 (46.41%), Postives = 94/153 (61.44%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP +PA+ FT++TRLDHNRA+ Q+++KL V ++++ + IWGNHS++QYPD+ HA V +G E V D W+ EFI V +RGA II+ R DH+ WV GTPEG W S + SDGSY VP GLI Sbjct: 133 PANTNALIAQTHAPDVPAERFTAMTRLDHNRAIAQLAKKLGVPSAEIRKITIWGNHSATQYPDIFHAQVGGRSG----AEAVGDQKWIAEEFIPRVAKRGAEIIEVRGASSAASAASAAIDHVYTWVNGTPEGDWTSAAIPSDGSYGVPEGLI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_PSYA2 (Malate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=mdh PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.790e-34 Identity = 77/153 (50.33%), Postives = 96/153 (62.75%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP + + FT++TRLDHNRA+ Q++ K + V+DVK +IIWGNHSS+QYPD+ +TVN K +LV D W G +I VQQRGAAIIKAR H+R WVLGT E WVSMGVYS+G Y + GLI Sbjct: 134 PANTNALIAQRNAPDLDPRNFTAMTRLDHNRAMAQLAGKTDSTVNDVKKMIIWGNHSSTQYPDLTASTVN----GKLALDLV-DRTWYEGTYIPEVQQRGAAIIKARGASSAASAANAAIAHMRTWVLGTDENDWVSMGVYSNGEYGIAKGLI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_PSYWF (Malate dehydrogenase OS=Psychrobacter sp. (strain PRwf-1) GN=mdh PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.060e-33 Identity = 74/153 (48.37%), Postives = 93/153 (60.78%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP + + FT++TRLDHNR + Q++E+ N V+DVK +IIWGNHSS+QYPD+ TVN KP E V D W +I +VQ+RGAAII+AR H+R W LGT E WVSMGVYS G Y + GLI Sbjct: 132 PANTNALIAQRNAPDLDPRNFTAMTRLDHNRGMAQLAEETNSTVNDVKKMIIWGNHSSTQYPDLTECTVN----GKPALEQVDRD-WYENSYIPSVQKRGAAIIEARGASSAASAANAAIAHMRTWALGTDENDWVSMGVYSQGEYGIAKGLI 279
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_NOCSJ (Malate dehydrogenase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=mdh PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.060e-33 Identity = 73/153 (47.71%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP F++LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPDV HA + G + E+V D W+ FI TV +RGAAII+AR D RDW+ G+ + WVSM V SDGSY VP GLI Sbjct: 132 PANTNALIAMTNAPDIPQARFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDVFHAEI----GGRNAAEVVGDQDWIESTFIPTVAKRGAAIIEARGSSSAASAASATIDAARDWLFGSADADWVSMAVVSDGSYGVPEGLI 280 The following BLAST results are available for this feature:
BLAST of CN188428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188428 ID=CN188428; Name=CN188428; organism=Citrus sinensis; type=EST; length=461bpback to top |