CN188428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_XYLF2 (Malate dehydrogenase OS=Xylella fastidiosa (strain M23) GN=mdh PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.411e-32 Identity = 70/153 (45.75%), Postives = 93/153 (60.78%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP + K FT++ RLDHNRAL Q+S KL V++++ +I+WGNHS + YPD AT A P+ E + D AW FI TV +RGAAII+AR DH+RDW+LG+ G W++MGV SDGSY +P G+I Sbjct: 134 PANTNAYIAMKSAPDLNPKHFTAMLRLDHNRALSQLSTKLGKPVANIEKLIVWGNHSPTMYPDYRFAT----ADGTPIIEAINDQAWNANSFIPTVSKRGAAIIEARGLSSAASAANAAIDHMRDWLLGS-NGKWITMGVPSDGSYGIPEGMI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_ACIBY (Malate dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=mdh PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 5.818e-32 Identity = 70/153 (45.75%), Postives = 95/153 (62.09%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRAL Q+++K V V+D++ + +WGNHS + Y D AT N GE +++ + D AW F+ TV +RGAAII+AR DH+RDW LGT G WV+MGV SDGSY +P G++ Sbjct: 134 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQVAQKAGVAVADIEKLTVWGNHSPTMYADYRFATAN---GES-LKDKINDPAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVM 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_ACIBT (Malate dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=mdh PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 5.818e-32 Identity = 70/153 (45.75%), Postives = 95/153 (62.09%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRAL Q+++K V V+D++ + +WGNHS + Y D AT N GE +++ + D AW F+ TV +RGAAII+AR DH+RDW LGT G WV+MGV SDGSY +P G++ Sbjct: 134 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQVAQKAGVAVADIEKLTVWGNHSPTMYADYRFATAN---GES-LKDKINDPAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVM 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_ACIBC (Malate dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=mdh PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 5.818e-32 Identity = 70/153 (45.75%), Postives = 95/153 (62.09%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRAL Q+++K V V+D++ + +WGNHS + Y D AT N GE +++ + D AW F+ TV +RGAAII+AR DH+RDW LGT G WV+MGV SDGSY +P G++ Sbjct: 134 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQVAQKAGVAVADIEKLTVWGNHSPTMYADYRFATAN---GES-LKDKINDPAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVM 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_ACIB5 (Malate dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=mdh PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 5.818e-32 Identity = 70/153 (45.75%), Postives = 95/153 (62.09%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRAL Q+++K V V+D++ + +WGNHS + Y D AT N GE +++ + D AW F+ TV +RGAAII+AR DH+RDW LGT G WV+MGV SDGSY +P G++ Sbjct: 134 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQVAQKAGVAVADIEKLTVWGNHSPTMYADYRFATAN---GES-LKDKINDPAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVM 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_ACIB3 (Malate dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=mdh PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 5.818e-32 Identity = 70/153 (45.75%), Postives = 95/153 (62.09%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRAL Q+++K V V+D++ + +WGNHS + Y D AT N GE +++ + D AW F+ TV +RGAAII+AR DH+RDW LGT G WV+MGV SDGSY +P G++ Sbjct: 134 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQVAQKAGVAVADIEKLTVWGNHSPTMYADYRFATAN---GES-LKDKINDPAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVM 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_XYLFA (Malate dehydrogenase OS=Xylella fastidiosa GN=mdh PE=3 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 7.599e-32 Identity = 69/153 (45.10%), Postives = 93/153 (60.78%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP + K FT++ RLDHNRAL Q+S KL+ V++++ +I+WGNHS + YPD AT A P+ E + D AW FI TV +RGAAII+ R DH+RDW+LG+ G W++MGV SDGSY +P G+I Sbjct: 134 PANTNAYIAMKSAPDLNPKHFTAMLRLDHNRALSQLSTKLSKPVANIEKLIVWGNHSPTMYPDYRFAT----ADGTPIIEAINDQAWNANSFIPTVSKRGAAIIEVRGLSSAASAANAAIDHMRDWLLGS-NGKWITMGVPSDGSYGIPEGMI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_KOCRD (Malate dehydrogenase OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=mdh PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 7.599e-32 Identity = 72/153 (47.06%), Postives = 95/153 (62.09%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP IPA F++LTRLDHNRA+ ++ + V DVK++ +WGNHS++QYPD++HA V AG +P +LV + W+ FI TV +RGAAI++AR DH RD +LG G W SM V SDGSY VP GL+ Sbjct: 133 PANTNALIAQRNAPDIPASRFSALTRLDHNRAVAMLAAQTGASVDDVKHLSVWGNHSATQYPDLDHARV---AG-RPALDLVSRE-WVQDTFIPTVAKRGAAILEARGASSAASAANATIDHARDLMLGNHRGDWTSMSVVSDGSYGVPEGLV 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_HERAR (Malate dehydrogenase OS=Herminiimonas arsenicoxydans GN=mdh PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 7.599e-32 Identity = 68/149 (45.64%), Postives = 92/149 (61.74%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVP 448 P N I + AP++PAK FT++ RLDHNRAL QI+ K V+ ++ + +WGNHS + YPD AT++ K V+E + D+ W F+ TV +RGAAII+AR DH+RDWVLGT G WV+MG+ SDGSY +P Sbjct: 135 PANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKTGKPVTAIEKLTVWGNHSPTMYPDYRFATID----GKSVKEAINDEVWNKDVFLPTVGKRGAAIIEARGVSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIP 278
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_ACIBS (Malate dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=mdh PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 7.599e-32 Identity = 70/153 (45.75%), Postives = 95/153 (62.09%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRAL Q+++K V V+D++ + +WGNHS + Y D AT N GE +++ + D AW F+ TV +RGAAII+AR DH+RDW LGT G WV+MGV SDGSY +P G++ Sbjct: 134 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQVAQKAGVVVADIEKLTVWGNHSPTMYADYRFATAN---GES-LKDKINDPAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVM 281 The following BLAST results are available for this feature:
BLAST of CN188428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188428 ID=CN188428; Name=CN188428; organism=Citrus sinensis; type=EST; length=461bpback to top |