CK939885
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_DESHD (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.414e-22 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 318 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 593 +IKPLGDRV++K +EEKT GI +P TA+ KPQ GEVVAVG GK ++ + VK G +VIYSKYAGTE++++G +LIL+E D++ ++ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93 HSP 2 Score: 72.0182 bits (175), Expect = 4.628e-12 Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 3 Query: 612 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 ++KPL DRV IK EE T G+++ + +KEKP G V+AVGPG + E+G R L + G+ V+YSKYAG K Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKM-EKGERIVLDVKVGDRVIYSKYAGTEVK 75
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_THETN (10 kDa chaperonin OS=Thermoanaerobacter tengcongensis GN=groS PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.099e-21 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 321 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 596 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + +++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQYIDGKRVEPEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 69.707 bits (169), Expect = 2.297e-11 Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 615 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 LKPL DRV +KV ++EE T GG++L +KEKP G V+AVGPG +G R + G+ V++SKYAG K Sbjct: 3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQY-IDGKRVEPEVKVGDRVIFSKYAGTEVK 75
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_DESVM (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=groS PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.099e-21 Identity = 51/94 (54.26%), Postives = 68/94 (72.34%), Query Frame = 3 Query: 318 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 596 ++KPL DRVLVK EEKT GG+F+P TA+ KP GEVVA G GK KL ++VK G V++SKYAGTE++ +G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLFIPDTAKEKPSRGEVVAAGPGKVAEDGKLIAMTVKKGDTVLFSKYAGTEIKLDGVEHLVMREDDILAIIE 95 HSP 2 Score: 83.9593 bits (206), Expect = 1.177e-15 Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 3 Query: 612 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+A GPG + E+G +++ G+TV++SKYAG K Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLFIPDTAKEKPSRGEVVAAGPGKVAEDGKLIAMTVKKGDTVLFSKYAGTEIK 76
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_DESDG (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.448e-21 Identity = 48/94 (51.06%), Postives = 71/94 (75.53%), Query Frame = 3 Query: 318 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 596 ++KPL DRVLVK EEKT GG+++P TA+ KP GEV+AVG GKT K + ++VK G V+++KYAGTE++ +G +HL++REDD++ I++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVIAVGPGKTADDGKVIAMTVKTGDVVLFNKYAGTEVKLDGVDHLVMREDDILAIIQ 95 HSP 2 Score: 80.1073 bits (196), Expect = 1.699e-14 Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 3 Query: 612 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G VIAVGPG ++G +++ G+ V+++KYAG K Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVIAVGPGKTADDGKVIAMTVKTGDVVLFNKYAGTEVK 76
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_SYNJB (10 kDa chaperonin OS=Synechococcus sp. GN=groS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21 Identity = 51/95 (53.68%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 315 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 596 +++KPLGDRVLVKI +EKT GGIFLP TA+ KPQ GEVVAVG GK + KL + +K G +V+YSKYAGTE++ +++L E D++ I++ Sbjct: 9 STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103 HSP 2 Score: 87.0409 bits (214), Expect = 1.390e-16 Identity = 38/77 (49.35%), Postives = 54/77 (70.13%), Query Frame = 3 Query: 606 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 + LKPL DRV +K+A+ +E TAGG+ L + +KEKP +G V+AVGPG ++EG P+ + G+ V+YSKYAG K Sbjct: 8 VSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVK 84
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_SYNJA (10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21 Identity = 51/95 (53.68%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 315 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 596 +++KPLGDRVLVKI +EKT GGIFLP TA+ KPQ GEVVAVG GK + KL + +K G +V+YSKYAGTE++ +++L E D++ I++ Sbjct: 9 STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103 HSP 2 Score: 87.4261 bits (215), Expect = 1.064e-16 Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = 3 Query: 597 TDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 T + LKPL DRV +K+A+ +E TAGG+ L + +KEKP +G V+AVGPG ++EG P+ + G+ V+YSKYAG K Sbjct: 5 TLNVSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVK 84
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_LAWIP (10 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=groS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.215e-20 Identity = 48/93 (51.61%), Postives = 68/93 (73.12%), Query Frame = 3 Query: 318 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 593 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVAVG GK KL ++VK G V+++KYAGTE++ +G HL++REDD++ ++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAVI 94 HSP 2 Score: 84.7297 bits (208), Expect = 6.899e-16 Identity = 39/75 (52.00%), Postives = 55/75 (73.33%), Query Frame = 3 Query: 612 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+AVGPG ++G P+++ G+TV+++KYAG K Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVK 76
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_LAWIN (10 kDa chaperonin OS=Lawsonia intracellularis GN=groS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.215e-20 Identity = 48/93 (51.61%), Postives = 68/93 (73.12%), Query Frame = 3 Query: 318 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 593 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVAVG GK KL ++VK G V+++KYAGTE++ +G HL++REDD++ ++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAVI 94 HSP 2 Score: 84.7297 bits (208), Expect = 6.899e-16 Identity = 39/75 (52.00%), Postives = 55/75 (73.33%), Query Frame = 3 Query: 612 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+AVGPG ++G P+++ G+TV+++KYAG K Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVK 76
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_EXISA (10 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groS PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.072e-20 Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 3 Query: 321 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 593 +KPLGDRV++++ EEKT GGI LP TA+ KPQ G+VVAVG G+ + K +D+ VK VIYSKYAGTE++ +G +LI+RE D++ I+ Sbjct: 2 LKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVKHDGKEYLIVRESDILAIV 93 HSP 2 Score: 77.7962 bits (190), Expect = 8.434e-14 Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 3 Query: 615 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 LKPL DRV I+V E EE T GG++L + +KEKP G V+AVG G + +EG R L + + V+YSKYAG K Sbjct: 2 LKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVK 75
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_DESDA (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=groS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.617e-20 Identity = 47/94 (50.00%), Postives = 71/94 (75.53%), Query Frame = 3 Query: 321 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKT--KLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 596 +KPL DRVLVK EEKT GG+++P TA+ KP G+VVAVG GK VG + ++VK G +V+++KYAGTE++ +G +HL++RE+D++ I++ Sbjct: 3 LKPLNDRVLVKRLETEEKTAGGLYIPDTAKEKPSKGQVVAVGPGK-VGDNGERTALAVKAGDEVLFNKYAGTEVKLDGVDHLVMREEDILAIID 95 HSP 2 Score: 84.3445 bits (207), Expect = 9.011e-16 Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 615 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 LKPLNDRV +K E EE TAGGL + + +KEKPS G V+AVGPG + + G R L++ G+ V+++KYAG K Sbjct: 3 LKPLNDRVLVKRLETEEKTAGGLYIPDTAKEKPSKGQVVAVGPGKVGDNGERTALAVKAGDEVLFNKYAGTEVK 76 The following BLAST results are available for this feature:
BLAST of CK939885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939885 ID=CK939885; Name=CK939885; organism=Citrus sinensis; type=EST; length=843bpback to top |