CK939843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.376e-25 Identity = 52/96 (54.17%), Postives = 65/96 (67.71%), Query Frame = 1 Query: 118 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 405 P +A+TCGQV + LAPCI + P CC GVR+LN A TT DRQ C CLK+ + G++P++ AG+PS+CGV IPY ISPSTDCSRV Sbjct: 23 PAASAVTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.104e-25 Identity = 54/93 (58.06%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 130 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 408 AI+CG VT+ L+PC+ +L TGG P P CC GV+ L A TTPDRQAACNCLK A G+I + N AA LP +CGV IPYKIS +T+C+ V+ Sbjct: 26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.294e-25 Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 1 Query: 133 ITCGQVTASLAPCIPFLRTGGRFPPP-PCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 405 +TCGQVT +LAPC+ +LR+ P P CC+ VR LN ARTT D++ AC CLK+ + G+ N AAGLP++CGV IPYKISP+TDC+RV Sbjct: 28 LTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.294e-25 Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 1 Query: 118 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 408 P A++CGQV + LAPC+P+L+ GR P CC GV+ L G A++ DR+ AC CLK A I+GI AAGLP CGV IPYKISPSTDCS+V+ Sbjct: 20 PHAEALSCGQVQSGLAPCLPYLQ--GRGPLGSCCGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.294e-25 Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 1 Query: 118 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 408 P +++CG+VT+ LAPC+P+L GR P CC GV+ L G A+T DR+ AC CLK A +I+GI AAGLP CGV IPYKISPSTDCS V+ Sbjct: 20 PHAESLSCGEVTSGLAPCLPYLE--GRGPLGGCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.914e-25 Identity = 55/94 (58.51%), Postives = 68/94 (72.34%), Query Frame = 1 Query: 127 NAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 408 +AITCG+V +LAPC+ +L+ GG P CC GVR+LN A TTPDRQAACNCLK A G+I + N AA LP +C V IPYKIS ST+C+ +R Sbjct: 23 SAITCGRVDTALAPCLGYLQ-GGPGPSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSISRLNANNAAALPGKCVVNIPYKISTSTNCATIR 115
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.030e-25 Identity = 54/92 (58.70%), Postives = 66/92 (71.74%), Query Frame = 1 Query: 130 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 405 AI+CGQV++++A C+ + R G P CCSGVRSLN ARTT DR+AACNCLK A I G+ AA +PS+CGV +PY IS STDCSRV Sbjct: 26 AISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLPN (Non-specific lipid-transfer protein 2 OS=Solanum pennellii GN=LTP2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.179e-24 Identity = 55/97 (56.70%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 118 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 408 P A+TCGQVT++LAPC+P+L G P CC GV+ L G A+TT DRQ AC CLK A + G+ AA LPS C V IPYKISPSTDCS+V+ Sbjct: 20 PHAEALTCGQVTSTLAPCLPYLMNRG--PLGGCCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKVQ 114
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.179e-24 Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = 1 Query: 130 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 405 AI+CGQV ++++PC+ + R GG P CCSGVRSLN A TT DR+ ACNCLK G+I G+ AA +PS+CGV IPY ISPS DCS V Sbjct: 27 AISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.179e-24 Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = 1 Query: 130 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 405 AI+CGQV ++++PC+ + R GG P CCSGVRSLN A TT DR+ ACNCLK G+I G+ AA +PS+CGV IPY ISPS DCS V Sbjct: 26 AISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116 The following BLAST results are available for this feature:
BLAST of CK939843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939843 ID=CK939843; Name=CK939843; organism=Citrus sinensis; type=EST; length=653bpback to top |