CK939843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.746e-20 Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 130 AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 408 A+TC VT +L PC+ +L+ G PPP CC+GVRSL A+T DR+ ACNC+K A + + VAA L SQCGVR+ Y +SP+ +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.949e-19 Identity = 41/92 (44.57%), Postives = 61/92 (66.30%), Query Frame = 1 Query: 130 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 405 A++CG VT+S+APC+ ++ P CCSGVR+LNG A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DCS++ Sbjct: 29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.949e-19 Identity = 41/92 (44.57%), Postives = 61/92 (66.30%), Query Frame = 1 Query: 130 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 405 A++CG VT+S+APC+ ++ P CCSGVR+LNG A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DCS++ Sbjct: 29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.341e-19 Identity = 45/96 (46.88%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 118 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 405 P + I CG VT++LA C+ +L G P CC GV+SL +A+TTPDR+ C CLK A I+G+ ++ A LP+ CGV IPY IS ST+C + Sbjct: 21 PTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.670e-19 Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 130 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 405 A+ CGQV + + PC+ +++ GG P CC+GVR L+ A+++ DRQ CNCLK I + N AA +PS+C V +PY ISP DCSR+ Sbjct: 26 ALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.154e-18 Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 1 Query: 130 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 405 AITC VT +L PC+P+LR+GG+ P P CC+G + L G RT DR+ AC C K A ++ ++P++A+ LP +CG+ I+P+ +C+ + Sbjct: 26 AITCNDVTGNLTPCLPYLRSGGK-PTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNCNTI 115
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.824e-17 Identity = 43/92 (46.74%), Postives = 54/92 (58.70%), Query Frame = 1 Query: 130 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 405 AI C QV LA C+P+L+ GG P P CC+G+ SL A DRQ ACNCLK TI GI + A LP++CGV I S + DC+ + Sbjct: 28 AIACPQVNMYLAQCLPYLKAGGN-PSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.382e-17 Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 133 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 405 + CGQV +SLA CIPFL G P CC+GV++L +A T+ DR+AAC C+K A IK + A+ LP +CGV I IS +T+C + Sbjct: 1 VDCGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 91
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.063e-17 Identity = 50/100 (50.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 118 PVT-NAI-TCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTIR-GIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 408 P+T NA+ +CG V +LA CI +L G CC+GV +L +A TTPDRQ AC CL+ A + G+ AAGLPS C V IPYKIS ST+C+ VR Sbjct: 20 PITANALMSCGTVNGNLAGCIAYLTRGAPLTQG-CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CK939843 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.182e-16 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 130 AITCGQVTASLAPCIPFLRTGG-RFPPPPCCSGVRSLNGVARTTPDRQAACNCLKRAYGTI-RGIKPNVAAGLPSQCGVRIPY--KISPSTDCS 399 A++CG+V ++L PC +L GG P P CC+GVR LNG+ TT DR+ AC C+K A + G+ + AAG+P +CG++IPY +I +T C+ Sbjct: 26 ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119 The following BLAST results are available for this feature:
BLAST of CK939843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939843 ID=CK939843; Name=CK939843; organism=Citrus sinensis; type=EST; length=653bpback to top |