CK939832

Overview
NameCK939832
Unique NameCK939832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939832 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 3.828e-91
Identity = 164/252 (65.08%), Postives = 188/252 (74.60%), Query Frame = 3
Query:   99 TLLISIAISTLM-VASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWXXXXXXXXXXXXXPWFSQ---ELXXTGRERLKWV 842
            T++ ++ + TL   A ASNF+ +FD+TWGD RGKI N G +LSLSLD+ SGSGF+SK EYLFG+IDMQLKLV GNSAGTVTAYYL S G+T DEIDFEFLGN +G PY LHTNVF  GKGDREQQF+LWFDPT +FHTYS++W PQ I+F VD  PIR F N E  GV FPK+QPMRIYSSLWNADDWATRGGL+KTDW++APFTA YR FNA AC                   Q   EL   GR RL+WV
Sbjct:    9 TIVATVLLVTLFGSAYASNFFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGATHDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTASSGCDPKFKSSFGDGKLQVATELNAYGRRRLRWV 260          
BLAST of CK939832 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.114e-90
Identity = 155/213 (72.77%), Postives = 174/213 (81.69%), Query Frame = 3
Query:  102 LLISIAIST---LMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFN 731
            LL+S+ ++    ++ ASA NFY+ FDITWG+GR  I  NGQLL+ +LDK SGSGFQSK EYLFGKIDM+LKLV GNSAGTVTAYYL S G+ WDEIDFEFLGN +G PYT+HTNVFT GKGDRE QF LWFDPTADFHTY+V WNP  I+F VDG PIR FKN E NGV +PKNQPMRIYSSLW ADDWAT GG +K DW+ APF ASYRNFN
Sbjct:   10 LLLSLLLAIGFFVVAASAGNFYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKGTAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPFKASYRNFN 222          
BLAST of CK939832 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 3.240e-90
Identity = 153/219 (69.86%), Postives = 182/219 (83.11%), Query Frame = 3
Query:   87 SKNFTLLISIAISTLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 743
            +K   LL+S+ +  L+  SA +FY +FDITWG+GR  I+ +GQLL+ +LDK SGSGFQSK EYLFGKIDM++KLV GNSAGTVTAYYL S G TWDEIDFEFLGN++G PY LHTNVFT GKG+RE QF+LWFDPTADFHTY+VLWNP  I+F VDG PIR FKN E+NGV +PK+QPM+IYSSLW ADDWAT+GG +KTDWT APF+ASY++FN   C
Sbjct:    6 TKQSLLLLSLLL--LISLSAGSFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYKSFNDVDC 222          
BLAST of CK939832 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 7.219e-90
Identity = 153/219 (69.86%), Postives = 179/219 (81.74%), Query Frame = 3
Query:   87 SKNFTLLISIAISTLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 743
            +K   LL++  +  + VA+ S FY  FDITWG GR  I  +GQLL+ +LDK SGSGFQSK EYLFGKIDM++KLVPGNSAGTVTAYYL S G TWDEIDFEFLGN++G PY +HTNVFT GKG+RE QF+LWFDPTADFHTY+VLWNP  I+F VDG PIR FKN E+NGV +PK+QPM+IYSSLW ADDWAT+GG +KTDWT APF+ASYR+FN   C
Sbjct:    6 TKQSPLLLASLLILIGVATGS-FYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYRSFNDVDC 223          
BLAST of CK939832 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 326.25 bits (835), Expect = 1.361e-88
Identity = 158/257 (61.48%), Postives = 190/257 (73.93%), Query Frame = 3
Query:   93 NFTLLISIAISTLM-VASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACV------WXXXXXXXXXXXXXPWFSQELXXTGRERLKWV 842
            N T+L+++ + T+   A + +F ++FD+TWG+ RGKI + G++LSLSLD+ SGSGF+SK EYLFG+IDMQLKLV GNSAGTVTAYYL S G T DEIDFEFLGN +G PY LHTNVF  GKG+REQQF+LWFDPT +FHTYS++W PQ I+F VD  PIR F N E  GV FPKNQPM+IYSSLWNADDWATRGGL+KTDW++APFTA YR FNA AC       +                + EL   GR RL+WV
Sbjct:    6 NRTVLMTLLVVTMAGTAFSGSFNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPTHDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTVSSGSSFCDPKFKSSFTNGESQVANELNAYGRRRLRWV 262          
BLAST of CK939832 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 6.353e-70
Identity = 129/225 (57.33%), Postives = 158/225 (70.22%), Query Frame = 3
Query:   87 SKNFTLLISIAISTLMVASASN------FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 743
            S  +T LI +++++   A+         F +++  TW     K LN G  + L LDK +G+GFQSK  YLFG   M +KLVPG+SAGTVTA+YL S  +  DEIDFEFLGN +G PY L TNVFT GKGDREQ+ +LWFDPT  +H YSVLWN  +IVFYVD  PIR FKN    GV FP NQPM+IY+SLWNADDWATRGGL KTDW++APF ASY+ F+ + C
Sbjct:    3 SSLWTCLILLSLASASFAANPRTPIDVPFGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGC 227          
BLAST of CK939832 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 9.174e-69
Identity = 117/222 (52.70%), Postives = 162/222 (72.97%), Query Frame = 3
Query:   87 SKNFTLLISIAISTL-MVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVW 749
            +K    +++ A++TL      ++F ++F +TWG  +  +  NG  L L LDK++GS  +SK  +LFG ++M +KLVPGNSAGTV AYYL S GST DEIDFEFLGN +G PYT+HTN++  GKG+REQQF  WF+PT  FH Y++ WNP  +V++VDG+PIR F+N ES G+ +P  Q M++++SLWNA+DWAT+GG +KT+WT APF A  R + A AC+W
Sbjct:    6 AKTLMFVLAAALATLGRTFVEADFSKNFIVTWG--KDHMFMNGTNLRLVLDKSAGSAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSSTGSTHDEIDFEFLGNATGQPYTIHTNLYAQGKGNREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARACLW 225          
BLAST of CK939832 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.044e-68
Identity = 120/197 (60.91%), Postives = 149/197 (75.63%), Query Frame = 3
Query:  153 FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 743
            F+++++ +W     K L+ G  + L LD++SG+GFQSK  YLFG   M+LKLV G+SAG VTA+YL S  +  DEIDFEFLGN +G PY L TNVFT GKGDREQ+ +LWFDPT  +H+YSVLWN  +IV +VD  PIR FKN +  GV FP NQPM+IYSSLW+ADDWATRGGL KTDW+ APFTASY +F+ + C
Sbjct:   32 FWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGC 228          
BLAST of CK939832 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.669e-68
Identity = 129/233 (55.36%), Postives = 156/233 (66.95%), Query Frame = 3
Query:  153 FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWXXXXXXXXXXXXXPWFS---QELXXTGRERLKWV 842
            F +++  TW     K LN G  + L LDK +G+GFQSK  YLFG   M +K+V G+SAGTVTA+YL S  S  DEIDFEFLGN +G PY L TNVFT G G+REQ+ +LWFDP+ D+H+YSVLWN  +IVF+VD  PIR FKN +  GV FP NQPM+IYSSLWNADDWATRGGL KT+W +APF ASYR F+ + C                W     Q+L     +RLKWV
Sbjct:   32 FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWDQKEFQDLDANQYKRLKWV 264          
BLAST of CK939832 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.947e-68
Identity = 124/218 (56.88%), Postives = 153/218 (70.18%), Query Frame = 3
Query:  102 LLISIAISTLMVASASN----FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 743
            +L+S+A S L  A        F +++  TW     K  N G  + L LDK +G+GFQ+K  YLFG   M +K+VPG+SAGTVTA+ L S  +  DEIDFEFLGN +G PY L TNVFT GKGDREQ+ +LWFDPT  +H YSVLWN  +IVF VD  PIR FKNL+  GV FP NQPM++Y+SLWNADDWATRGGL KTDW++APF A Y+ F+ + C
Sbjct:   11 VLVSLASSALCAAPRRPVDVPFGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGC 228          
The following BLAST results are available for this feature:
BLAST of CK939832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
XTH15_ARATH3.828e-9165.08Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH14_ARATH1.114e-9072.77Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH13_ARATH3.240e-9069.86Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH7.219e-9069.86Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH1.361e-8861.48Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN6.353e-7057.33Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH26_ARATH9.174e-6952.70Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC2.044e-6860.91Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH2.669e-6855.36Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN5.947e-6856.88Probable xyloglucan endotransglucosylase/hydrolase... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004745_A03 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IF_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939832 ID=CK939832; Name=CK939832; organism=Citrus sinensis; type=EST; length=842bp
GGGGAACTCGCACACACATAAATACCAACCCTTATAAGCTGCTTTCTGGA
AACTCTCTCTTTATTGATTGCAGTACTATGGCTTACTCGAAAAATTTTAC
CCTGCTCATCTCTATAGCAATCAGCACTTTGATGGTTGCTTCTGCTAGTA
ATTTCTACCAAGACTTTGATATCACTTGGGGAGATGGCCGTGGTAAGATA
CTCAACAACGGCCAGCTTCTCTCCCTCTCCCTTGACAAAGCCTCAGGCTC
AGGCTTCCAGTCCAAGAGCGAGTACCTTTTTGGCAAAATCGACATGCAAC
TCAAGCTTGTCCCTGGCAATTCTGCCGGCACAGTCACCGCCTACTACTTA
AAATCACCAGGATCAACATGGGATGAGATAGACTTCGAATTCTTGGGGAA
TTTAAGTGGTGATCCTTATACTCTTCATACTAATGTGTTCACAAATGGCA
AAGGTGACAGAGAGCAACAATTCCACCTCTGGTTTGACCCCACTGCTGAC
TTTCACACCTATTCCGTTCTCTGGAATCCCCAACGTATTGTCTTCTATGT
TGATGGCTCGCCAATTAGAGAGTTCAAGAACTTGGAATCAAACGGCGTAC
TCTTTCCCAAAAACCAGCCGATGAGGATTTACTCGAGTCTCTGGAACGCC
GATGACTGGGCCACGAGAGGTGGCCTTATCAAAACTGACTGGACCCAAGC
TCCCTTCACTGCTTCTTACAGAAACTTCAATGCCAATGCTTGCGTCTGGT
CTAATGGAAAATCCTCTTGCAACTCAAAAAATAATAATCCATGGTTCTCG
CAAGAACTTGANNNCACTGGCCGAGAGAGACTCAAATGGGTG
back to top