CK939813

Overview
NameCK939813
Unique NameCK939813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.796e-52
Identity = 103/179 (57.54%), Postives = 126/179 (70.39%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFL 665
            DP  LQD CVA ++  + VFVNGKFCKDPK   A DF YSGL    NT N LG + T  +V +IPGLNTLG+S  R+D+A  GQ PPH HPRA+EI +V +G L VGFV+S+Q NN L  KVL +GDVFVFP GLIHFQ N+ +T A A++   SQ PG + IA+ VFG+NPSI  + L
Sbjct:   27 DPNPLQDFCVAASET-NRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEVL 204          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.876e-52
Identity = 104/179 (58.10%), Postives = 126/179 (70.39%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFL 665
            DP  LQD CVA+ + K+GVFVNG+FCKDPKL  ++DFF SGL  PGNT  RLG     AN   IPGLNTLG+   RID+AP G  PPH HPRASEI LV++G L VGFV+S+  N TL +K+L  GDVFV P GL+ F  NIGKTNA A  A+ SQ PG +++ + VFG+ P I+P  L
Sbjct:   26 DPSPLQDYCVAVPE-KNGVFVNGEFCKDPKLVTSDDFFASGLNIPGNTNKRLGSFVNPAN---IPGLNTLGVGIARIDFAPGGLIPPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVFVHPIGLVQFHANIGKTNAVAIGAVGSQNPGYISVGDAVFGSKPPIDPKIL 200          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.514e-51
Identity = 101/179 (56.42%), Postives = 124/179 (69.27%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFL 665
            DP  LQD CVA N+  +GV+VNG+FCKDPK     DF+ SGL  PGNT    G   T  +VE++PGLNTLG+   R D+AP G  PPH HPR S+IFLV++G L+VGFV+S++ N TL  KVL  GDVFVFP+GLIHF  NIG+TNA   SA  SQ PG + I + VFG+ P I+P  L
Sbjct:   26 DPSPLQDYCVATNET-NGVYVNGEFCKDPKRVTTNDFYTSGLNVPGNTIIGPGARNTVVDVERLPGLNTLGVDIARYDFAPGGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHFHANIGETNAVVISAGGSQDPGRIIIGDAVFGSKPLIDPKVL 203          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.753e-51
Identity = 111/183 (60.66%), Postives = 134/183 (73.22%), Query Frame = 3
Query:  126 TDPGHLQDVCVA-INDPKDGVFVNGKFCKDPKLARAEDFFYSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFL 665
            +DP  LQD CVA +N P   V VNG  CK+P  A A+DFF +  L KP +T N++G + T  NV Q+PGLNTLGIS  R+D+AP G  PPH HPRA+EIF VLEGTLYVGFVTS+  +N L++KVLNKGDVFVFP+GLIHFQFN      A A +AL+SQ PG +TIAN VFG+NP I+ D L
Sbjct:   25 SDPSPLQDFCVADLNSP---VRVNGFVCKNPMNASADDFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNP-DNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIANAVFGSNPPISDDIL 203          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.674e-50
Identity = 108/181 (59.67%), Postives = 125/181 (69.06%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFL 665
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP G+ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVLNKGDVFVFP+GLIHFQFN      A A +AL+SQ PG +TIAN VFG+ P I+ D L
Sbjct:   24 SDPSPLQDFCVA--DKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAITIANAVFGSKPPISDDIL 201          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.851e-49
Identity = 107/181 (59.12%), Postives = 124/181 (68.51%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFL 665
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP G+ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVLNKGDVFVFP+GLIHFQFN      A A +AL+SQ PG +TIAN VFG+ P I+   L
Sbjct:   23 SDPSPLQDFCVA--DKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDKVL 200          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 1.851e-49
Identity = 107/183 (58.47%), Postives = 120/183 (65.57%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFY-SGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQL--NNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFL 665
            +DP  LQD CVA  D    VFVNG  CK+PK   A DFF    LG PGNT N  G   T   V ++PGLNTLGIS  RID+AP GQ PPH HPRA+EI  VL+GTL VGFVTS+Q    N    K+L  GDVFVFPQGLIHFQ N G   A A +AL+SQ PG +TIAN VFG+ P I  D L
Sbjct:   28 SDPSQLQDFCVA--DKLSAVFVNGFVCKNPKQVTANDFFLPKALGVPGNTVNAQGSAVTPVTVNELPGLNTLGISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPPILDDVL 208          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.417e-49
Identity = 106/177 (59.89%), Postives = 123/177 (69.49%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSIN 653
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP G+ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVLNKGDVFVFP+GLIHFQFN      A A +AL+SQ PG +TIAN VFG+ P I+
Sbjct:   23 SDPSPLQDFCVA--DMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPIS 196          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.385e-49
Identity = 107/181 (59.12%), Postives = 124/181 (68.51%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFL 665
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTL+VGFVTS+  NNTL +KVLNKGDVFVFP GLIHFQFN      A A +AL+SQ PG +TIAN VFG+ P I+ + L
Sbjct:   23 SDPSPLQDFCVA--DKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLHVGFVTSNP-NNTLFSKVLNKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGVITIANAVFGSKPPISDEVL 200          
BLAST of CK939813 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.033e-49
Identity = 107/181 (59.12%), Postives = 123/181 (67.96%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFL 665
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVL KGDVFVFP GLIHFQFN      A A +AL+SQ PG +TIAN VFG+ P I+ + L
Sbjct:   24 SDPSPLQDFCVA--DEHSPVLVNGFACLDPKHVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLKKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVL 201          
The following BLAST results are available for this feature:
BLAST of CK939813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL16_ARATH6.796e-5257.54Germin-like protein subfamily 1 member 6 OS=Arabid... [more]
GL13_ARATH8.876e-5258.10Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
GL14_ARATH1.514e-5156.42Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GL82_ORYSJ5.753e-5160.66Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]
GL87_ORYSJ1.674e-5059.67Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL88_ORYSJ1.851e-4959.12Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]
GL41_ORYSJ1.851e-4958.47Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
GL810_ORYSJ2.417e-4959.89Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL89_ORYSJ5.385e-4959.12Germin-like protein 8-9 OS=Oryza sativa subsp. jap... [more]
GL86_ORYSJ7.033e-4959.12Germin-like protein 8-6 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004745_C07 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939813 ID=CK939813; Name=CK939813; organism=Citrus sinensis; type=EST; length=665bp
GGGGAAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGAC
TTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGC
TTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCACCTTCAAGATG
TCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAG
TTCTGTAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTACTCAGG
GCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAG
ATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCA
TTCCGCATTGACTATGCACCATATGGCCAAAGGCCACCTCACTTTCACCC
CCGTGCCAGTGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTT
TTGTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAAT
AAGGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAA
CATTGGAAAAACAAATGCAGCTGCTTATTCTGCTCTAAACAGCCAATTCC
CGGGTGAAGTTACCATAGCCAACACAGTCTTTGGAGCCAATCCTTCAATC
AATCCCGATTTTCTT
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