CK939739

Overview
NameCK939739
Unique NameCK939739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK939739 vs. ExPASy Swiss-Prot
Match: RL32_DROAC (60S ribosomal protein L32 OS=Drosophila acanthoptera GN=RpL32 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.003e-39
Identity = 78/114 (68.42%), Postives = 92/114 (80.70%), Query Frame = 2 
Query:  116 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 457
            R QSDR   +   WR+PKGID+RVRR+FKG  LMPNIGYGS+K+TRH LP GFKKF+VHN +ELE+L+M NR YC EIAH VS+ KRKEIVERA QL + +TN  ARLRSQE+E
Sbjct:   21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNREYCGEIAHGVSSNKRKEIVERAKQLSVRLTNPNARLRSQENE 134
[Close]
BLAST of CK939739 vs. ExPASy Swiss-Prot
Match: RL32_DROYA (60S ribosomal protein L32 OS=Drosophila yakuba GN=RpL32 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 77/114 (67.54%), Postives = 92/114 (80.70%), Query Frame = 2 
Query:  116 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 457
            R QSDR   +   WR+PKGID+RVRR+FKG  LMPNIGYGS+K+TRH LP GFKKF+VHN +ELE+L+M NR YC EIAH VS++KRKEIVERA QL + +TN   RLRSQE+E
Sbjct:   21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQENE 134
[Close]
BLAST of CK939739 vs. ExPASy Swiss-Prot
Match: RL32_DROSI (60S ribosomal protein L32 OS=Drosophila simulans GN=RpL32 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 77/114 (67.54%), Postives = 92/114 (80.70%), Query Frame = 2 
Query:  116 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 457
            R QSDR   +   WR+PKGID+RVRR+FKG  LMPNIGYGS+K+TRH LP GFKKF+VHN +ELE+L+M NR YC EIAH VS++KRKEIVERA QL + +TN   RLRSQE+E
Sbjct:   21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQENE 134
[Close]
BLAST of CK939739 vs. ExPASy Swiss-Prot
Match: RL32_DROPS (60S ribosomal protein L32 OS=Drosophila pseudoobscura pseudoobscura GN=RpL32 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 78/114 (68.42%), Postives = 92/114 (80.70%), Query Frame = 2 
Query:  116 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 457
            R QSDR   +   WR+PKGID+RVRR+FKG  LMPNIGYGS+K+TRH LP GFKKF+VHN +ELE+L+M NR YC EIAH VS++KRKEIVERA QL I +TN   RLRSQE+E
Sbjct:   21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134
[Close]
BLAST of CK939739 vs. ExPASy Swiss-Prot
Match: RL32_DROPE (60S ribosomal protein L32 OS=Drosophila persimilis GN=RpL32 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 78/114 (68.42%), Postives = 92/114 (80.70%), Query Frame = 2 
Query:  116 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 457
            R QSDR   +   WR+PKGID+RVRR+FKG  LMPNIGYGS+K+TRH LP GFKKF+VHN +ELE+L+M NR YC EIAH VS++KRKEIVERA QL I +TN   RLRSQE+E
Sbjct:   21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134
[Close]
BLAST of CK939739 vs. ExPASy Swiss-Prot
Match: RL32_DROMI (60S ribosomal protein L32 OS=Drosophila miranda GN=RpL32 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 78/114 (68.42%), Postives = 92/114 (80.70%), Query Frame = 2 
Query:  116 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 457
            R QSDR   +   WR+PKGID+RVRR+FKG  LMPNIGYGS+K+TRH LP GFKKF+VHN +ELE+L+M NR YC EIAH VS++KRKEIVERA QL I +TN   RLRSQE+E
Sbjct:   21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134
[Close]
BLAST of CK939739 vs. ExPASy Swiss-Prot
Match: RL32_DROME (60S ribosomal protein L32 OS=Drosophila melanogaster GN=RpL32 PE=1 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 77/114 (67.54%), Postives = 92/114 (80.70%), Query Frame = 2 
Query:  116 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 457
            R QSDR   +   WR+PKGID+RVRR+FKG  LMPNIGYGS+K+TRH LP GFKKF+VHN +ELE+L+M NR YC EIAH VS++KRKEIVERA QL + +TN   RLRSQE+E
Sbjct:   21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQENE 134
[Close]
BLAST of CK939739 vs. ExPASy Swiss-Prot
Match: RL32_DROAZ (60S ribosomal protein L32 OS=Drosophila azteca GN=RpL32 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 78/114 (68.42%), Postives = 92/114 (80.70%), Query Frame = 2 
Query:  116 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 457
            R QSDR   +   WR+PKGID+RVRR+FKG  LMPNIGYGS+K+TRH LP GFKKF+VHN +ELE+L+M NR YC EIAH VS++KRKEIVERA QL I +TN   RLRSQE+E
Sbjct:   21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134
[Close]
BLAST of CK939739 vs. ExPASy Swiss-Prot
Match: RL32_DROAI (60S ribosomal protein L32 OS=Drosophila affinis GN=RpL32 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 78/114 (68.42%), Postives = 92/114 (80.70%), Query Frame = 2 
Query:  116 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 457
            R QSDR   +   WR+PKGID+RVRR+FKG  LMPNIGYGS+K+TRH LP GFKKF+VHN +ELE+L+M NR YC EIAH VS++KRKEIVERA QL I +TN   RLRSQE+E
Sbjct:   21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134
[Close]
BLAST of CK939739 vs. ExPASy Swiss-Prot
Match: RL32_DROSU (60S ribosomal protein L32 OS=Drosophila subobscura GN=RpL32 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.711e-39
Identity = 78/114 (68.42%), Postives = 92/114 (80.70%), Query Frame = 2 
Query:  116 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 457
            R QSDR   +   WR+PKGID+RVRR+FKG  LMPNIGYGS+K+TRH LP GFKKF+VHN +ELE+L+M NR YC EIAH VS++KRKEIVERA QL I +TN   RLRSQE+E
Sbjct:   21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134
The following BLAST results are available for this feature:
BLAST of CK939739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
RL32_DROAC1.003e-3968.4260S ribosomal protein L32 OS=Drosophila acanthopte... [more]
RL32_DROYA1.310e-3967.5460S ribosomal protein L32 OS=Drosophila yakuba GN=... [more]
RL32_DROSI1.310e-3967.5460S ribosomal protein L32 OS=Drosophila simulans G... [more]
RL32_DROPS1.310e-3968.4260S ribosomal protein L32 OS=Drosophila pseudoobsc... [more]
RL32_DROPE1.310e-3968.4260S ribosomal protein L32 OS=Drosophila persimilis... [more]
RL32_DROMI1.310e-3968.4260S ribosomal protein L32 OS=Drosophila miranda GN... [more]
RL32_DROME1.310e-3967.5460S ribosomal protein L32 OS=Drosophila melanogast... [more]
RL32_DROAZ1.310e-3968.4260S ribosomal protein L32 OS=Drosophila azteca GN=... [more]
RL32_DROAI1.310e-3968.4260S ribosomal protein L32 OS=Drosophila affinis GN... [more]
RL32_DROSU1.711e-3968.4260S ribosomal protein L32 OS=Drosophila subobscura... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004746_C01 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIF_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939739 ID=CK939739; Name=CK939739; organism=Citrus sinensis; type=EST; length=655bp
GGGGGCCTCGCGGCCAAGCTGAACCCTAGCTCAAATCACTGGGAAGAAGG
TAAGGAAGATGGCGGTTCCGTTACTGTCGAAGAAGATAGTGAAGAAGAGG
CTGAAGAAGTTCAAGAGGCCTCAGAGCGATCGCAAGATCTCCGTCAAGGA
AAATTGGCGCAGACCAAAGGGTATTGATTCCCGGGTGCGAAGAAAGTTCA
AGGGATGCACTCTAATGCCCAACATTGGTTATGGTTCGGACAAGAAGACA
CGCCACTATCTTCCAAATGGTTTCAAGAAATTTGTGGTGCACAATACGAA
AGAGCTTGAATTGTTGATGATGCACAACAGGACCTACTGTGCTGAAATTG
CCCATGATGTTTCCACGAGGAAGAGGAAAGAGATTGTGGAGCGAGCTGCC
CAACTTGATATTGTTGTGACTAACAAGCTTGCTAGATTGAGAAGCCAGGA
AGATGAATGAGATTAAACAATCTGTTCTTTTTAGTAGTAGTGAGTCTTGT
TTTGTACGCTTTATCAAAATTTTGAAAATTTTGACTTACAAAGATACGAC
CGTTTGTGATTTTTTATTTTTTTTGGGATGAGTGATAATACAGTAGTTTT
TATTTCATAAAAATATTATTATTGTTAAAAAAAAAAAAAAAAAAAAAAAA
AAAAA
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