CK939734

Overview
NameCK939734
Unique NameCK939734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_BACC7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain AH187) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.548e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 3 
Query:  300 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK+   G    IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_BACC3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain 03BB102) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.548e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 3 
Query:  300 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK+   G    IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_BACC2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain G9842) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.548e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 3 
Query:  300 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK+   G    IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_BACC0 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain AH820) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.548e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 3 
Query:  300 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK+   G    IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_BACAN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus anthracis GN=ispF PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.548e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 3 
Query:  300 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK+   G    IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_BACAH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus thuringiensis (strain Al Hakam) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.548e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 3 
Query:  300 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK+   G    IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_BACAC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.548e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 3 
Query:  300 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK+   G    IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_BACAA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus anthracis (strain A0248) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.548e-40
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 3 
Query:  300 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK+   G    IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
[Close]
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_ACIBL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Acidobacteria bacterium (strain Ellin345) GN=ispF PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.548e-40
Identity = 79/156 (50.64%), Postives = 107/156 (68.59%), Query Frame = 3 
Query:  303 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770
            RVG GFD H    G PL IGG+ +PH  G   HSDGDVLLH + DA+LGA+   DIG  FP SDPKWKGA S VFI+EA+R ++ AGY +GN+D +L+L  PK+ P+ + I+ ++++LL  +PT V +KAKT E ++  G   +  AH V+LL K+
Sbjct:    3 RVGLGFDSHEFREGIPLRIGGLTIPHTHGLSGHSDGDVLLHAITDALLGAVAAGDIGAFFPPSDPKWKGANSVVFIEEAMRHIETAGYRVGNVDCSLVLNAPKIGPHAKAIQESVAKLLKIEPTAVGIKAKTPEGLNLDG---TALAHVVVLLEKR 155
[Close]
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_BACC1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain ATCC 10987) GN=ispF PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.247e-39
Identity = 77/157 (49.04%), Postives = 106/157 (67.52%), Query Frame = 3 
Query:  300 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770
            FR+G GFD+H    G PLIIGG+ +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+KA T EK+   G    IA+  V+LL KK
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGVTIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
The following BLAST results are available for this feature:
BLAST of CK939734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ISPF_BACC79.548e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACC39.548e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACC29.548e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACC09.548e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACAN9.548e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACAH9.548e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACAC9.548e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACAA9.548e-4049.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_ACIBL9.548e-4050.642-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACC11.247e-3949.042-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004746_D02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIF_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939734 ID=CK939734; Name=CK939734; organism=Citrus sinensis; type=EST; length=877bp
GGGGATATCGAGCAGACAGCAGAGCACGAACAGCGTCTCTCCTCTCTTCG
TAAAATTAGATGGTGTTGACGATGGCCGCTCAATCATACACCACCACTCC
TCTCCACAGCAAAATTACGAATAAGCCACTATGTCCTCCTCCGTTGAGTT
TGAAGCCTCGTAGCTTAACCGCCAAACATCTCCGCACAACACAGTCAACG
TCGCTGCCTCGTATTTCAGTTTCAGCTGCAGCCATTTCTTCCATCGAAGT
TAAAGAGTCATCGGCTTCGATCCAACCGTCCAAATCAAAATCACTGCCTT
TTCGTGTGGGCCACGGGTTTGATCTTCATAGATTGGAGCCTGGCTACCCT
CTGATCATCGGTGGAATCAATGTTCCCCACGAGAGAGGCTGCGAGGCTCA
CTCTGACGGTGATGTTTTGCTTCACTGTGTTGTGGATGCAATTTTGGGAG
CATTGGGTCTTCCTGATATTGGTCAGATATTTCCTGATTCTGATCCTAAG
TGGAAGGGTGCACCATCCTCTGTTTTTATCAAAGAAGCTGTGAGACTCAT
GGATGAGGCCGGCTATGAGATTGGCAACTTGGATGCCACGCTGATTCTTC
AAAGACCAAAATTGAGCCCATACAAGGAGACTATCCGAACCAACTTGTCT
GAACTGCTAGGAGCAGACCCCACCGTTGTAAATCTGAAAGCGAAGACTCA
TGAAAAAGTTGATAGCCTTGGTGAANNNCGAAGTATTGCAGCTCACACTG
TGATCCTTCTCATGAAGAAGTAAAATAAACGATTTGGGAATTGTCTTAAA
TGTAGCAGTTGTATCCTATTATCATTGTTGTATTTGTATTCTGCTTACAA
AGACTATTCACTTGGTATAGATTTCCA
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