CK939734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_BURMS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia mallei (strain SAVP1) GN=ispF PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.290e-36 Identity = 72/159 (45.28%), Postives = 107/159 (67.30%), Query Frame = 3 Query: 294 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ L VN+KAKT+EK+ LG I A L++++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_BURMA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia mallei GN=ispF PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.290e-36 Identity = 72/159 (45.28%), Postives = 107/159 (67.30%), Query Frame = 3 Query: 294 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ L VN+KAKT+EK+ LG I A L++++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_BURM9 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia mallei (strain NCTC 10229) GN=ispF PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.290e-36 Identity = 72/159 (45.28%), Postives = 107/159 (67.30%), Query Frame = 3 Query: 294 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ L VN+KAKT+EK+ LG I A L++++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_BURM7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia mallei (strain NCTC 10247) GN=ispF PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.290e-36 Identity = 72/159 (45.28%), Postives = 107/159 (67.30%), Query Frame = 3 Query: 294 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ L VN+KAKT+EK+ LG I A L++++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_BURA4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia ambifaria (strain MC40-6) GN=ispF PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.290e-36 Identity = 75/158 (47.47%), Postives = 105/158 (66.46%), Query Frame = 3 Query: 294 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMK 767 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+D +KGA S V ++E + AG+ I N+D+T+I Q PKL+P+ + +R N++ LG VN+KAKT+EK+ LG I A LL+K Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDAAFKGADSRVLLRECAARVKAAGFTIQNVDSTVIAQAPKLAPHIDGMRANIAADLGLPLERVNVKAKTNEKLGYLGRGEGIEAQAAALLVK 158
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_AZOSB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Azoarcus sp. (strain BH72) GN=ispF PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.290e-36 Identity = 75/157 (47.77%), Postives = 101/157 (64.33%), Query Frame = 3 Query: 297 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMK 767 PFRVG GFD+H L PG LI+GG+++P G HSD DVLLH + DA+LGA GL DIG++FPD+DP GA S V ++EA + AG+E N+DATLI + P++ P+ + N++ LG D +N+K KT EK+ G IAA V LL + Sbjct: 4 PFRVGQGFDVHALVPGRALIVGGVDIPFSAGLLGHSDADVLLHALTDALLGAAGLGDIGRLFPDTDPAHAGADSRVLLREAYARVKAAGWEAVNVDATLICRAPRILPHAPAMVVNIAADLGMDAAAINIKGKTTEKLGFTGRGEGIAAQVVALLAR 160
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_ANASP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=ispF PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.290e-36 Identity = 68/157 (43.31%), Postives = 106/157 (67.52%), Query Frame = 3 Query: 294 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLM 764 + R+G+G+D+HRL LI+GG+++PHE G HSD DVL H ++DA+LGAL L DIG FP +DP+W GA S V + + L+ G+ IGN+D+ ++ +RPKL P+ +T+R L+++L +P + +KA T+EK+ +G I A+ V+LL+ Sbjct: 3 MSIRIGNGYDIHRLVSDRALILGGVHIPHELGLLGHSDADVLTHAIMDAMLGALSLGDIGHYFPPTDPQWAGADSLVLLSQVNELIRTQGWRIGNIDSVVVAERPKLKPHIKTMRDKLADILQLEPNQIGVKATTNEKLGPVGREEGICAYAVVLLV 159
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_XYLFA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Xylella fastidiosa GN=ispF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.685e-36 Identity = 73/158 (46.20%), Postives = 103/158 (65.19%), Query Frame = 3 Query: 294 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMK 767 L R+G G+D+H PG +++GG+ VPH G AHSDGDV+LH + DA+LGALGL DIGQ FP SD +WKGA S VF++ L+ E + +GN+DAT I + PK++PY +R ++ LL P V++KA T E + +G +AA V+LL + Sbjct: 13 LNVRIGQGYDVHAFGPGDHVMLGGVRVPHRCGVLAHSDGDVILHALCDAMLGALGLGDIGQHFPPSDVRWKGADSGVFVRHCHLLLRERDWCVGNVDATAICESPKIAPYVNAMREGIARLLEVQPECVSVKATTSEGLGFIGRGEGLAAQVVVLLYR 170
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_PHOLL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Photorhabdus luminescens subsp. laumondii GN=ispF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.685e-36 Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 3 Query: 303 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770 R+GHGFD+H+ P+IIGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KG S ++EA + E GY IGNLD T+I Q PK+ P+ +R NL+E L +N+KA T EK+ +G IA V LL+K+ Sbjct: 2 RIGHGFDVHKFGGEGPIIIGGVRIPYEQGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGVDSRKLLREAYSRIREKGYRIGNLDITIIAQAPKMLPHIPQMRVNLAEDLQCHIDDINVKATTTEKLGFVGRKEGIACEAVALLVKE 157
BLAST of CK939734 vs. ExPASy Swiss-Prot
Match: ISPF_HAES2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus somnus (strain 2336) GN=ispF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.685e-36 Identity = 72/156 (46.15%), Postives = 108/156 (69.23%), Query Frame = 3 Query: 303 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGEXRSIAAHTVILLMKK 770 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA+ L DIG++FPD+D ++KGA S ++ A + + + GY++GN+D T+I Q PK+ PY +++RT +++ L D VN+KA T EK+ G IA V+LL+K+ Sbjct: 3 RIGHGFDVHAFGGEGPIIIGGVAIPYEKGLVAHSDGDVALHALTDALLGAMALGDIGKLFPDTDIQYKGADSRRLLRTAYQAILDKGYQVGNVDITIIAQAPKMRPYIDSMRTVIAQDLHCDIEQVNVKATTTEKLGFTGRSEGIACEAVVLLIKQ 158 The following BLAST results are available for this feature:
BLAST of CK939734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939734 ID=CK939734; Name=CK939734; organism=Citrus sinensis; type=EST; length=877bpback to top |