CX300692
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RLP24_YEAST (Ribosome biogenesis protein RLP24 OS=Saccharomyces cerevisiae GN=RLP24 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.255e-12 Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = 2 Query: 62 CKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVK--KKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKER 394 C F + YPG GI F+R+D++ F F SKC + F R P KL WT +RK K++A ++ +RR Y+R +V TL+ + + + + A + +R KE+ Sbjct: 6 CHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAGKELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEK 118
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RLP24_PONAB (Probable ribosome biogenesis protein RLP24 OS=Pongo abelii GN=RSL24D1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.529e-11 Identity = 37/121 (30.58%), Postives = 61/121 (50.41%), Query Frame = 2 Query: 47 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAE--AVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKK 403 ++ E C F IYPG G+ F+R+D +VF F SKC + F R P K+ WT +RK K++ + +KRR Y R + T++ +++ V + ++ + I R+KK Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKRRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKR-------VEEIKQKRQAKFIMNRLKK 114
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RLP24_RAT (Probable ribosome biogenesis protein RLP24 OS=Rattus norvegicus GN=Rsl24d1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.608e-11 Identity = 40/131 (30.53%), Postives = 65/131 (49.62%), Query Frame = 2 Query: 47 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAE--AVKKKRRATKKPYSRSIVGATL------EVIQKRRTEK------PEVRDAAREAALREIKERI 397 ++ E C F IYPG G+ F+R+D +VF F SKC + F + P K+ WT +RK K++ + +KRR Y R + T+ E I++RR K + ++ + +RE+K+ I Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQRRQAKFIMNRLKKNKELQKVQDIREVKQNI 131
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RLP24_MOUSE (Probable ribosome biogenesis protein RLP24 OS=Mus musculus GN=Rsl24d1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.608e-11 Identity = 36/121 (29.75%), Postives = 61/121 (50.41%), Query Frame = 2 Query: 47 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAE--AVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKK 403 ++ E C F IYPG G+ F+R+D +VF F SKC + F + P K+ WT +RK K++ + +KRR Y R + T++ +++ V + ++ + I R+KK Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKR-------VEEIKQKRQAKFIMNRLKK 114
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RLP24_BOVIN (Probable ribosome biogenesis protein RLP24 OS=Bos taurus GN=RSL24D1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.608e-11 Identity = 36/121 (29.75%), Postives = 61/121 (50.41%), Query Frame = 2 Query: 47 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAE--AVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKK 403 ++ E C F IYPG G+ F+R+D +VF F SKC + F + P K+ WT +RK K++ + +KRR Y R + T++ +++ V + ++ + I R+KK Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKR-------VEEIKQKRQAKFIMNRLKK 114
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RLP24_HUMAN (Probable ribosome biogenesis protein RLP24 OS=Homo sapiens GN=RSL24D1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.406e-11 Identity = 36/121 (29.75%), Postives = 61/121 (50.41%), Query Frame = 2 Query: 47 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAE--AVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKK 403 ++ E C F IYPG G+ F+R+D +VF F SKC + F + P K+ WT +RK K++ + +KRR Y R + T++ +++ V + ++ + I R+KK Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKR-------VEEIKQKRQAKFIMNRLKK 114
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RLP24_CAEEL (Probable ribosome biogenesis protein RLP24 OS=Caenorhabditis elegans GN=rpl-24.2 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.910e-11 Identity = 32/91 (35.16%), Postives = 52/91 (57.14%), Query Frame = 2 Query: 47 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVK--KKRRATKKPYSRSIVGATLE 313 ++ E C F + IYPG GI+F+R+DS VF F S+C + F + P KL +T R+ K++ +A + ++RR Y R++ T+E Sbjct: 1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARRARGKELINDATQLLEQRRDEPVKYERAMFQKTIE 91 The following BLAST results are available for this feature:
BLAST of CX300692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300692 ID=CX300692; Name=CX300692; organism=Citrus sinensis; type=EST; length=404bpback to top |