CK939722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: RRP3_ASPTN (ATP-dependent rRNA helicase rrp3 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=rrp3 PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 233 IH +SQ RL F+ ++ +L+ATD+ RG+DI V+ V+NYD+P + TY+HRVGR R G G+A +FV+ Sbjct: 296 IHGQLSQSARLASLNKFRARSRNLLIATDVAARGLDIPAVDYVLNYDLPQDSKTYIHRVGRTARAGKSGIAFSFVT 371
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: RRP3_ASPFU (ATP-dependent rRNA helicase rrp3 OS=Aspergillus fumigatus GN=rrp3 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 39/97 (40.21%), Postives = 61/97 (62.89%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKE 296 +H +SQ RL F+ ++ ILVATD+ RG+DI V++V+N+D+P + TY+HRVGR R G G+AI+FV+ D +I +++ +KE Sbjct: 322 LHGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQ-YDVEIWLRIEGALGKKLKE 417
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: ROK1_YARLI (ATP-dependent RNA helicase ROK1 OS=Yarrowia lipolytica GN=ROK1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDI 254 IH M+ +R + F+ G +L+ TD++ RGID +N+VINYD+P SA +Y+HR+GR GR G G A+TF + +++ Sbjct: 394 IHGDMTAAKRASVIDRFRNGEVWVLICTDVLARGIDFRGINLVINYDVPQSAQSYVHRIGRTGRAGRLGKAVTFFTKEDATNV 476
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: ROK1_ASPTN (ATP-dependent RNA helicase rok1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=rok1 PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 37/75 (49.33%), Postives = 53/75 (70.67%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK-GLAITF 227 +HS +S +R KGF++G ILV TDL+ RG+D +N V+NYD+P+SA Y+HRVGR GR G + G+A+T+ Sbjct: 552 LHSELSDSQRSEIMKGFRKGEIWILVTTDLLARGVDFRGINGVVNYDIPNSAAVYVHRVGRTGRAGREGGVAVTY 626
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: PRP5_ASPTN (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=prp5 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 39/101 (38.61%), Postives = 59/101 (58.42%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 308 IH G Q +R + + FK G +L+AT + RG+D++++ +V+NYD P+ + Y+HR GR GR G G A+TF L + Q RF VDI + +Q Sbjct: 831 IHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTF---------LTEDQERFSVDIAKALKQ 922
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: PRP11_SCHPO (Pre-mRNA-processing ATP-dependent RNA helicase prp11 OS=Schizosaccharomyces pombe GN=prp11 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 35/104 (33.65%), Postives = 65/104 (62.50%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDT 317 IH G Q +R + +K G +L+AT +V RG+D++ + +V+NYD P+ + Y+HRVGR GR G G+A+TF++ + ++ +A ++ + +P+++ T Sbjct: 698 IHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKA-LKMSKQPVPKELQT 800
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: DRS1_PHANO (ATP-dependent RNA helicase DRS1 OS=Phaeosphaeria nodorum GN=DRS1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 311 +H MSQE+R+ + F+ G L+ATD+ RG+DI+ V+ VINY+ P S + YLHRVGR R G G A T + + V+ + K + Q+ Sbjct: 560 LHGNMSQEQRIQAVEAFRSGKSSYLLATDVASRGLDIKNVSTVINYEAPQSHEIYLHRVGRTARAGRSGRACTLAAEPDRKVVKQAVKQSRDQGSKVVSRQV 661
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: DRS1_ASPTN (ATP-dependent RNA helicase drs1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=drs1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 38/89 (42.70%), Postives = 52/89 (58.43%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQA 272 +H MSQE+R+ + F++G L+ATDL RG+DI+ V VINY+ P S + YLHRVGR R G G A T + + V+A Sbjct: 579 LHGSMSQEQRIKSVENFRDGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKA 667
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: DED1_MAGGR (ATP-dependent RNA helicase DED1 OS=Magnaporthe grisea GN=DED1 PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYMPS 335 IH +Q ER + F+ G ILVAT + RG+DI V VINYD+P D Y+HR+GR GR G G+A F +S + ++ + +++P ++T+ M S Sbjct: 479 IHGDRTQRERERALEMFRTGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFDMKDNSGVAQELLNILKEAKQDIPPFLETAARMKS 588
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: DDX52_HUMAN (Probable ATP-dependent RNA helicase DDX52 OS=Homo sapiens GN=DDX52 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 266 IH+ +Q++R F+ G +L+ T L+ RGID + VN+VINYD P S+ Y+HR+GR GR G KG AITF + D +L V Sbjct: 442 IHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTE-DDKPLLRSV 527 The following BLAST results are available for this feature:
BLAST of CK939722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939722 ID=CK939722; Name=CK939722; organism=Citrus sinensis; type=EST; length=693bpback to top |