CK939722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: DEAD_SHIFL (Cold-shock DEAD box protein A OS=Shigella flexneri GN=deaD PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 35/98 (35.71%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 299 ++ M+Q R + K+G IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L ++ ++ I E+ Sbjct: 275 LNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERTMKLTIPEV 371
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: DEAD_KLEPN (Cold-shock DEAD box protein A OS=Klebsiella pneumoniae GN=deaD PE=3 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 35/98 (35.71%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 299 ++ M+Q R + K+G IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L ++ ++ I E+ Sbjct: 275 LNGDMNQALREQALERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERTMKLTIPEV 371
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: DEAD_ECOLI (Cold-shock DEAD box protein A OS=Escherichia coli (strain K12) GN=deaD PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 35/98 (35.71%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 299 ++ M+Q R + K+G IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L ++ ++ I E+ Sbjct: 275 LNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERTMKLTIPEV 371
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: DEAD_ECOL6 (Cold-shock DEAD box protein A OS=Escherichia coli O6 GN=deaD PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 35/98 (35.71%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 299 ++ M+Q R + K+G IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L ++ ++ I E+ Sbjct: 275 LNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERTMKLTIPEV 371
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: DEAD_ECO57 (Cold-shock DEAD box protein A OS=Escherichia coli O157:H7 GN=deaD PE=3 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 35/98 (35.71%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 6 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 299 ++ M+Q R + K+G IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L ++ ++ I E+ Sbjct: 275 LNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERTMKLTIPEV 371
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: DDX5_PONAB (Probable ATP-dependent RNA helicase DDX5 OS=Pongo abelii GN=DDX5 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 3 Query: 3 GIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 227 GIH SQ+ER FK G IL+ATD+ RG+D+E V VINYD P+S++ Y+HR+GR R G A TF Sbjct: 370 GIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTF 444
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: DDX5_PANTR (Probable ATP-dependent RNA helicase DDX5 OS=Pan troglodytes GN=DDX5 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 3 Query: 3 GIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 227 GIH SQ+ER FK G IL+ATD+ RG+D+E V VINYD P+S++ Y+HR+GR R G A TF Sbjct: 370 GIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTF 444
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: DDX5_MOUSE (Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus GN=Ddx5 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 3 Query: 3 GIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 227 GIH SQ+ER FK G IL+ATD+ RG+D+E V VINYD P+S++ Y+HR+GR R G A TF Sbjct: 370 GIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTF 444
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: DDX5_MACFA (Probable ATP-dependent RNA helicase DDX5 OS=Macaca fascicularis GN=DDX5 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 3 Query: 3 GIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 227 GIH SQ+ER FK G IL+ATD+ RG+D+E V VINYD P+S++ Y+HR+GR R G A TF Sbjct: 370 GIHGDKSQQERGWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTF 444
BLAST of CK939722 vs. ExPASy Swiss-Prot
Match: DDX5_HUMAN (Probable ATP-dependent RNA helicase DDX5 OS=Homo sapiens GN=DDX5 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 3 Query: 3 GIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 227 GIH SQ+ER FK G IL+ATD+ RG+D+E V VINYD P+S++ Y+HR+GR R G A TF Sbjct: 370 GIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTF 444 The following BLAST results are available for this feature:
BLAST of CK939722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939722 ID=CK939722; Name=CK939722; organism=Citrus sinensis; type=EST; length=693bpback to top |