CK939720

Overview
NameCK939720
Unique NameCK939720
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.061e-44
Identity = 98/204 (48.04%), Postives = 134/204 (65.69%), Query Frame = 2
Query:  125 DPGHLQDVCVAINDPKDGVF-VNGKFCKDPKLARVEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYG-QRPPHIHPRASEIFLVLEGTLYVGFV--TSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFG-ANPSINPDFLGKAFQLDPKIVKDLQNKF 715
            DP  LQD+CVA      G   VNG  CK       EDFFF GLGKP +  + N +G   T A VE+IPGLNTLG+S  R+DYAP+G   PPH HPRA+EI  V +G L VGFV  T+   ++ LI +V+ KG VFVFP+GL+H++ ++G+  A A SA +SQ PG    AD +FG ++P++  D L +AFQ+D  +V+++++KF
Sbjct:   29 DPDMLQDICVADYKSLQGPLRVNGFPCKPEANVTAEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLLHYERSVGEKPAVAISAFDSQLPGTQAAADALFGSSSPAVPTDVLARAFQVDGGVVENIKSKF 232          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.916e-44
Identity = 95/198 (47.98%), Postives = 127/198 (64.14%), Query Frame = 2
Query:  122 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 715
            +D   LQD CV   D K    +NG  CK    A   DFFFSGLG P NT+   GV  + ANV   PGLNTLG+S   +++AP G  PPH HPRA+E  +V+EG+++VGF+T+   NNTL +KVLN G++FV P+GL+HFQ+N+GK  A   ++ NSQ PG   +  T+FG+NP+I    L K F+ D   V  L++KF
Sbjct:   28 SDSDPLQDFCVG--DLKASPSINGFPCKSSVSA--SDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTT---NNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTKTFRTDDVTVNKLKSKF 218          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 7.916e-44
Identity = 94/198 (47.47%), Postives = 128/198 (64.65%), Query Frame = 2
Query:  122 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 715
            +D   LQD CV   D K    +NG  CK    A   DFF+SGLG P +T+N  GV    ANV   PGLNTLGIS   ++ AP G  PPH+HPRA+E+  V+EG+++VGF+++   NNTL +KVLN G+ FV P+GL+HFQ+N+G+  A   +A NSQ PG V +  T+FG+ P I    L +AF+ D   V++L++KF
Sbjct:   28 SDSDPLQDFCVG--DLKASASINGFPCKSAVSA--SDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGSVFVGFLST---NNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPSTLFGSKPEIPNAVLTRAFRTDDTTVQNLKSKF 218          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 1.034e-43
Identity = 99/197 (50.25%), Postives = 122/197 (61.93%), Query Frame = 2
Query:  125 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 715
            D   LQD+CVA  D    + VNG  CK       EDFF + L K G T N  G   T ANV++IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    N LIAK + KG+ FVFP+GL+HFQ N G   A   +  NSQ PG V I  T+F A P +  + L KAFQ+  K V+ +++KF
Sbjct:   22 DADALQDLCVA--DYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITT---TNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKF 213          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.326e-42
Identity = 95/202 (47.03%), Postives = 129/202 (63.86%), Query Frame = 2
Query:  122 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 724
            TDP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +  T+FG+NP I    L KA +++ ++V+ L++KF  G
Sbjct:   24 TDPDPLQDFCVADLDGK-AVSVNGHTCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEARVVELLKSKFAAG 223          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.344e-42
Identity = 92/169 (54.44%), Postives = 109/169 (64.50%), Query Frame = 2
Query:  125 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFG 631
            DP  LQD+CVA  D   G+ +NG  CKD       DFF  GL KPG T N  G   T ANV  IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEGTL VGF+T+    N LI++ L KGDVF FP+GL+HFQ N G   A+  +A NSQ PG  ++  T+FG
Sbjct:   24 DPDMLQDLCVA--DLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTT---ANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFG 187          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.156e-41
Identity = 94/203 (46.31%), Postives = 127/203 (62.56%), Query Frame = 2
Query:  122 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 727
            ++P  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   TD NV + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+     NSQ P  V +  T+FG+NP I    L KA +++  +V+ L++KF  G+
Sbjct:   24 SNPHPLQDFCVADLDGK-AVSVNGHMCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPIPKPVLTKALRVEAGVVELLKSKFAGGS 224          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.272e-41
Identity = 93/202 (46.04%), Postives = 128/202 (63.37%), Query Frame = 2
Query:  122 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 724
            +DP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPH+HPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +  T+FG+NP I    L KA +++  +V+ L++KF  G
Sbjct:   24 SDPDPLQDFCVADLDGK-AVSVNGHPCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEAGVVELLKSKFAAG 223          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.192e-41
Identity = 94/203 (46.31%), Postives = 128/203 (63.05%), Query Frame = 2
Query:  122 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 727
            +DP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG++P I    L KA +++  +V+ L++KF  G+
Sbjct:    1 SDPDPLQDFCVADLDGK-AVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGGS 201          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.113e-40
Identity = 91/202 (45.05%), Postives = 124/202 (61.39%), Query Frame = 2
Query:  122 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 724
            TD   LQD CVA  D K  V VNG  CK    A  E  F S +   G+  AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +  + N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:   29 TDADPLQDFCVADLDSK--VTVNGHACKPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDTGVVELLKSKFTGG 228          
The following BLAST results are available for this feature:
BLAST of CK939720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL14_ORYSJ6.061e-4448.04Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
GLT2_ARATH7.916e-4447.98Germin-like protein subfamily T member 2 OS=Arabid... [more]
GLT1_ARATH7.916e-4447.47Germin-like protein subfamily T member 1 OS=Arabid... [more]
RHRE_PEA1.034e-4350.25Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GER2_WHEAT3.326e-4247.03Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
GL21_ARATH4.344e-4254.44Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GER3_WHEAT2.156e-4146.31Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
OXO2_HORVU6.272e-4146.04Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
OXO1_HORVU8.192e-4146.31Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GL34_ORYSJ3.113e-4045.05Putative germin-like protein 3-4 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004746_E10 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939720 ID=CK939720; Name=CK939720; organism=Citrus sinensis; type=EST; length=847bp
GGGACACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGACTTAA
TCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGCTTTG
GCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATGTCTG
TGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAGTTCT
GCAAGGACCCCAAGCTTGCGAGAGTAGAAGATTTCTTCTTCTCAGGGCTA
GGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAGATGC
AAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCATTCC
GTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCCCCGT
GCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTTGT
GACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAATAAGG
GAGATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAACATT
GGAAAAACAAATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCGGG
TGAAGTTACCATAGCCGACACAGTCTTTGGAGCCAATCCTTCAATCAATC
CCGATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAAGATAGTGAAAGAT
CTTCAAAATAAGTTCATTAATGGCAATTAGGAGAAGGAATTAATGAGCTT
TAATATAAATGGCCTCTTCACTAGTGGCTGTATTACTTTATCTCCAGATT
ATCATATCTTAATTAATGTAATAAAAGAGGTCTCTCATGAANNNNNC
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