CK939720

Overview
NameCK939720
Unique NameCK939720
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.935e-40
Identity = 91/202 (45.05%), Postives = 123/202 (60.89%), Query Frame = 2
Query:  122 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 724
            TD   LQD CVA  D K  V VNG  CK    A  E  F S +   G+  AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +    N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:   29 TDADPLQDFCVADLDSK--VTVNGHACKPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 228          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.545e-39
Identity = 90/202 (44.55%), Postives = 122/202 (60.40%), Query Frame = 2
Query:  122 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 724
            TD   LQD CVA  D    V VNG  CK    A  E  F S +   G+  AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +    N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:   27 TDADPLQDFCVA--DLNSEVTVNGHACKPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 226          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GL51_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0197200 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.442e-39
Identity = 99/204 (48.53%), Postives = 123/204 (60.29%), Query Frame = 2
Query:  125 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSGLGKP------GNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFI 718
            DP  LQD CVA  DP   V VNG  CKDP     +DFFFSG+G+P      G TA+R     T  +V+ IPGLNTLG SA R+D AP G  PPH HPRASE  +VL G +Y GFVTS   ++ ++AKVL +GDVF  PQGL+HF  N G   AA Y++L+SQ PG V +AD +  A   +  D + K    D   V  ++  FI
Sbjct:   30 DPNPLQDFCVA--DPTSKVRVNGLPCKDPAAVTADDFFFSGVGEPAAGGGRGATASRR-YGFTARSVD-IPGLNTLGASAARVDVAPGGVFPPHYHPRASETAVVLAGAVYFGFVTS-YPDSRVVAKVLRRGDVFAVPQGLVHFLHNNGSEPAALYASLSSQNPGLVLVADALLAA--PLPVDLVAKTLLTDEATVDKIRANFI 226          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.001e-38
Identity = 89/204 (43.63%), Postives = 120/204 (58.82%), Query Frame = 2
Query:  125 DPGHLQDVCVAINDPKDGVFVN-------GKFCKDPKLARVEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 715
            DP  +QD CVA+  P+ G           G  CK       +DFFF+GL    +T NR G + T AN E  PGLNTLG+S  R+D AP G  P H HPRA+E+  V+ G +  GFV++        +KVL +G+ FV P+G+IHFQ+N+G   A   +A NSQ PG V    T+FG++P I    L K+FQ+D KI+K L++KF
Sbjct:   26 DPEPVQDFCVAVV-PRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVST---AGEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAKSFQVDAKIIKLLKSKF 225          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.708e-38
Identity = 91/201 (45.27%), Postives = 121/201 (60.20%), Query Frame = 2
Query:  125 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 724
            DP  LQD CVA  D +  V +NG  CK    A  E  F S L   G+  AN  G + T  +V   PG+NTLG+S  RID+AP G  PPH+HPRA+E+ +VL G L VG + S    N   ++V+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:   28 DPDPLQDFCVADLDSE--VTLNGYPCKPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 226          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.207e-37
Identity = 84/201 (41.79%), Postives = 118/201 (58.71%), Query Frame = 2
Query:  125 DPGHLQDVCVAINDPKDGVFVNGKF----CKDPKLARVEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 715
            DP  +QD CVA+  P+ G   +  +    CK       +DFFF+GL   G+T N  G      NVE  P LNTLG++  R+D AP G  P H HPRA+E+  V+ G + VGFV++        +KV+ +G+ F  P+GL+HFQ+N G  +A A +  NSQ PG V  A  +FGA+P I    L K+FQ+D +I+K L++KF
Sbjct:   36 DPEPIQDFCVAV--PRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFVST---AGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALFGADPEIPDAVLAKSFQVDAEIIKLLKSKF 231          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.267e-33
Identity = 82/197 (41.62%), Postives = 113/197 (57.36%), Query Frame = 2
Query:  125 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 715
            D   LQD+CVA  D +    V+G  CK       +DFF   + +  +T+N  GV+ T A V   PGLNTLG+S  R D AP G  PPH HPRASE+ LVL G + VGF T+    N L +KV+ + ++FV P+GL HFQ N+G  NA+  +  +SQ PG VT    +F   P++  + L K F +    V  +++KF
Sbjct:   30 DSPPLQDICVA--DLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGGLNPPHSHPRASELVLVLSGEVMVGFTTA---ANRLFSKVVREKELFVVPRGLQHFQLNVGAGNASFVAMFDSQSPGLVTPTFALFATQPAMPMEVLAKTFLMGEDEVGAIKSKF 221          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.211e-33
Identity = 79/192 (41.15%), Postives = 111/192 (57.81%), Query Frame = 2
Query:  140 QDVCVAINDPKDGVFVNGKFCKDPKLARVEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 715
            QD CVA  D +     +G  CK    +  EDFF+SGL  P NT+N  G+    AN+   PGLNTLGIS + +  AP G   PH HP  +E  +V+EG++ VGF+T+   N TL +KV+  GD+FV P GLIH++ N+GKT     + +    P EV +  T+    P+I  + L  AF+ D K +  L++KF
Sbjct:   41 QDFCVA--DLQATPTNSGYPCKSQVTS--EDFFYSGLNTPLNTSNPKGIAANPANLLTFPGLNTLGISMYNVAIAPGGYNQPHSHPGVTEAGVVIEGSVLVGFLTT---NYTLYSKVIGPGDMFVIPPGLIHYEGNVGKTQCRLLTVVADDLPSEVGVPHTLLATKPAIPNEVLISAFKADSKTINMLRSKF 225          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32
Identity = 83/201 (41.29%), Postives = 108/201 (53.73%), Query Frame = 2
Query:  122 TDPGHLQDVCVA--INDP-KDGVFVNGKFCKDPKLARVEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 715
            +DP  +QD C+   +  P  D  F     CK+      EDF FSGL   GN     G        E  PGLNTLGIS  R D  P    PPH HPRA+E+  +++G +Y GFV S   NN + AKV+ +G++ V+P+GL+HFQ N+G   A     LNSQ PG   I   VFG+   IN + L KAF L  K +  L+ +F
Sbjct:   25 SDPDPIQDFCIPKPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDS---NNKVYAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGS--GINEELLMKAFGLSLKQIGTLKKRF 219          
BLAST of CK939720 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 5.322e-32
Identity = 76/190 (40.00%), Postives = 113/190 (59.47%), Query Frame = 2
Query:  122 TDPGHLQDVCVAINDPK-DGVFVNGKFCKDPKLARVEDFFFSGLGKPGNTANR-LGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAA-AYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLD 682
            +DP  LQD CV+        +F+NGK CKDP  A V DF  S L +PGNT  +   ++ T      +PGLNT+G++  R+D+   G  PPH+HPRASE+ + L+G L VGFV +   +  +  + L+ G+ FVFP+GLIHF +NI   ++A A S L+SQ PG   ++ + F + P    + L  A+ ++
Sbjct:   18 SDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDT---SGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFISKPPFLVEVLKSAYDIN 204          
The following BLAST results are available for this feature:
BLAST of CK939720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL36_ORYSJ6.935e-4045.05Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL35_ORYSJ1.545e-3944.55Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL51_ORYSJ3.442e-3948.53Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL38_ORYSJ1.001e-3843.63Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL33_ORYSJ1.708e-3845.27Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL37_ORYSJ4.207e-3741.79Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL12_ORYSJ1.267e-3341.62Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
GLT3_ARATH8.211e-3341.15Germin-like protein subfamily T member 3 OS=Arabid... [more]
GL32_ARATH2.389e-3241.29Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
GL11_ARATH5.322e-3240.00Germin-like protein subfamily 1 member 1 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004746_E10 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939720 ID=CK939720; Name=CK939720; organism=Citrus sinensis; type=EST; length=847bp
GGGACACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGACTTAA
TCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGCTTTG
GCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATGTCTG
TGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAGTTCT
GCAAGGACCCCAAGCTTGCGAGAGTAGAAGATTTCTTCTTCTCAGGGCTA
GGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAGATGC
AAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCATTCC
GTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCCCCGT
GCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTTGT
GACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAATAAGG
GAGATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAACATT
GGAAAAACAAATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCGGG
TGAAGTTACCATAGCCGACACAGTCTTTGGAGCCAATCCTTCAATCAATC
CCGATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAAGATAGTGAAAGAT
CTTCAAAATAAGTTCATTAATGGCAATTAGGAGAAGGAATTAATGAGCTT
TAATATAAATGGCCTCTTCACTAGTGGCTGTATTACTTTATCTCCAGATT
ATCATATCTTAATTAATGTAATAAAAGAGGTCTCTCATGAANNNNNC
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