CX300688

Overview
NameCX300688
Unique NameCX300688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length377
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.379e-28
Identity = 65/125 (52.00%), Postives = 85/125 (68.00%), Query Frame = 2
Query:    5 EQKGPSASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVAR-YTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            ++KG +A  F  DF  GG+S AV+KTA APIERVKL+IQ QD   ++K+G+++  Y GIG CF R  +E+G  + WRGN  NVIRYFPTQA NFAFKD  K +F     +  +  +F  N+ASGG
Sbjct:   79 QEKGFAA--FATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDE--MLKAGRLSEPYKGIGECFGRTIKEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGG 199          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT1_RABIT (ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=SLC25A4 PE=2 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 1.379e-28
Identity = 66/119 (55.46%), Postives = 82/119 (68.91%), Query Frame = 2
Query:   23 ASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMF-PKYSPKKEFGMFFLTNMASGG 376
            A SFL DF AGG++ AV+KTA APIERVKL++Q Q A+  I + K  +Y GI +C  R+ +EQG  +FWRGN  NVIRYFPTQA NFAFKD  K +F       K+F  +F  N+ASGG
Sbjct:    5 ALSFLKDFLAGGVAAAVSKTAVAPIERVKLLLQVQHASKQISAEK--QYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGG 121          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 1.379e-28
Identity = 62/117 (52.99%), Postives = 83/117 (70.94%), Query Frame = 2
Query:   29 SFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVAR-YTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            +F++DF  GG+S AV+KTA APIERVKL+IQ QD   +IKSG+++  Y GI +CF R  +++G ++ WRGN  NVIRYFPTQA NFAFKD  K +F     +  +  +F  N+ASGG
Sbjct:   86 NFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDE--MIKSGRLSEPYKGIVDCFKRTIKDEGFSSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGG 200          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 1.379e-28
Identity = 62/118 (52.54%), Postives = 83/118 (70.34%), Query Frame = 2
Query:   26 SSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVAR-YTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            ++F +DF  GG+S AV+KTA APIERVKL+IQ QD   +IK+G+++  Y GIG+CF R  +++G  + WRGN  NVIRYFPTQA NFAFKD  K +F     +  +  +F  N+ASGG
Sbjct:   78 TNFALDFLMGGVSAAVSKTAAAPIERVKLLIQNQDE--MIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGG 193          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT_DROME (ADP,ATP carrier protein OS=Drosophila melanogaster GN=sesB PE=2 SV=4)

HSP 1 Score: 124.405 bits (311), Expect = 1.802e-28
Identity = 66/119 (55.46%), Postives = 82/119 (68.91%), Query Frame = 2
Query:   23 ASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKK-EFGMFFLTNMASGG 376
            A  F+ DFAAGGIS AV+KTA APIERVKL++Q Q  +  I   K  +Y G+ +CF R+ +EQG ++FWRGN  NVIRYFPTQA NFAFKD  K +F     K  +F  +F  N+ASGG
Sbjct:   20 AVGFVKDFAAGGISAAVSKTAVAPIERVKLLLQVQHISKQISPDK--QYKGMVDCFIRIPKEQGFSSFWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFAGNLASGG 136          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT1_BOVIN (ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=1 SV=3)

HSP 1 Score: 124.405 bits (311), Expect = 1.802e-28
Identity = 65/119 (54.62%), Postives = 82/119 (68.91%), Query Frame = 2
Query:   23 ASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMF-PKYSPKKEFGMFFLTNMASGG 376
            A SFL DF AGG++ A++KTA APIERVKL++Q Q A+  I + K  +Y GI +C  R+ +EQG  +FWRGN  NVIRYFPTQA NFAFKD  K +F       K+F  +F  N+ASGG
Sbjct:    5 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEK--QYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGG 121          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT3_BOVIN (ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 3.073e-28
Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 2
Query:   23 ASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKK-EFGMFFLTNMASGG 376
            A SF  DF AGGI+ A++KTA APIERVKL++Q Q A+  I + K  +Y GI +C  R+ +EQG+ +FWRGN  NVIRYFPTQA NFAFKD  K +F     K+ +F  +F  N+ASGG
Sbjct:    5 AISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADK--QYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGG 121          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT2_TACAC (ADP/ATP translocase 2 OS=Tachyglossus aculeatus aculeatus GN=SLC25A5 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.013e-28
Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   20 SASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKK-EFGMFFLTNMASGG 376
            +A SF  DF AGG++ A++KTA APIERVKL++Q Q A+  I + K  +Y GI +C  R+ +EQG+ +FWRGN  NVIRYFPTQA NFAFKD  K +F     K+ +F  +F  N+ASGG
Sbjct:    4 AAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADK--QYKGIMDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGG 121          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 4.013e-28
Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 2
Query:   26 SSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVAR-YTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            ++F +DF  GG+S AV+KTA APIERVKL+IQ QD   ++K+G++   Y GI +CF R  +++G+ + WRGN  NVIRYFPTQA NFAFKD  K +F     K  +  +F  N+ASGG
Sbjct:   82 TNFAIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDE--MLKAGRLTEPYKGIRDCFGRTIRDEGIGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGG 197          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT2_RAT (ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 5.242e-28
Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   20 SASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKK-EFGMFFLTNMASGG 376
            +A SF  DF AGG++ A++KTA APIERVKL++Q Q A+  I + K  +Y GI +C  R+ +EQG+ +FWRGN  NVIRYFPTQA NFAFKD  K +F     K+ +F  +F  N+ASGG
Sbjct:    4 AAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADK--QYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGG 121          
The following BLAST results are available for this feature:
BLAST of CX300688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
ADT1_SOLTU1.379e-2852.00ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT1_RABIT1.379e-2855.46ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=... [more]
ADT1_MAIZE1.379e-2852.99ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
ADT1_ARATH1.379e-2852.54ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT_DROME1.802e-2855.46ADP,ATP carrier protein OS=Drosophila melanogaster... [more]
ADT1_BOVIN1.802e-2854.62ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=... [more]
ADT3_BOVIN3.073e-2854.62ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=... [more]
ADT2_TACAC4.013e-2853.33ADP/ATP translocase 2 OS=Tachyglossus aculeatus ac... [more]
ADT2_ARATH4.013e-2851.69ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
ADT2_RAT5.242e-2853.33ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc2... [more]

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Properties
Property NameValue
Genbank descriptionC08001B07SK PhyRootSw1 Citrus sinensis cDNA clone C08001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300688 ID=CX300688; Name=CX300688; organism=Citrus sinensis; type=EST; length=377bp
GTCTGAACAAAAAGGTCCAAGCGCTTCTAGTTTCCTTGTTGACTTCGCTG
CCGGAGGTATCTCTGGTGCCGTTGCCAAGACTGCCACCGCTCCTATTGAG
AGAGTCAAGTTGATCATCCAGACCCAGGATGCCAACCCTTTAATCAAGTC
CGGCAAGGTCGCCAGATACACCGGTATTGGCAACTGCTTCACCCGTGTGT
ACCAGGAGCAAGGTTTAGCTGCTTTCTGGCGTGGTAACTTCACCAACGTC
ATCCGTTATTTCCCTACCCAGGCTTTCAACTTCGCCTTCAAGGATACCAT
CAAGGGTATGTTCCCAAAGTACAGCCCAAAGAAGGAGTTCGGTATGTTCT
TCCTTACTAACATGGCTTCCGGTGGTC
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