CX300688

Overview
NameCX300688
Unique NameCX300688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length377
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT2_MOUSE (ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 5.242e-28
Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   20 SASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKK-EFGMFFLTNMASGG 376
            +A SF  DF AGG++ A++KTA APIERVKL++Q Q A+  I + K  +Y GI +C  R+ +EQG+ +FWRGN  NVIRYFPTQA NFAFKD  K +F     K+ +F  +F  N+ASGG
Sbjct:    4 AAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADK--QYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGG 121          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT2_HUMAN (ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 PE=1 SV=6)

HSP 1 Score: 122.865 bits (307), Expect = 5.242e-28
Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   20 SASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKK-EFGMFFLTNMASGG 376
            +A SF  DF AGG++ A++KTA APIERVKL++Q Q A+  I + K  +Y GI +C  R+ +EQG+ +FWRGN  NVIRYFPTQA NFAFKD  K +F     K+ +F  +F  N+ASGG
Sbjct:    4 AAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADK--QYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGG 121          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT2_BOVIN (ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 5.242e-28
Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   20 SASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKK-EFGMFFLTNMASGG 376
            +A SF  DF AGG++ A++KTA APIERVKL++Q Q A+  I + K  +Y GI +C  R+ +EQG+ +FWRGN  NVIRYFPTQA NFAFKD  K +F     K+ +F  +F  N+ASGG
Sbjct:    4 AAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADK--QYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGG 121          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT3_PIG (ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 6.846e-28
Identity = 65/119 (54.62%), Postives = 82/119 (68.91%), Query Frame = 2
Query:   23 ASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPK-KEFGMFFLTNMASGG 376
            A SF  DF AGGI+ A++KTA APIERVKL++Q Q A+  I + K  +Y GI +C  R+ +EQG+ +FWRGN  NVIRYFPTQA NFAFKD  K +F     K  +F  +F  N+ASGG
Sbjct:    5 AISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADK--QYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGG 121          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT3_HUMAN (ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 PE=1 SV=4)

HSP 1 Score: 122.479 bits (306), Expect = 6.846e-28
Identity = 65/119 (54.62%), Postives = 82/119 (68.91%), Query Frame = 2
Query:   23 ASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPK-KEFGMFFLTNMASGG 376
            A SF  DF AGGI+ A++KTA APIERVKL++Q Q A+  I + K  +Y GI +C  R+ +EQG+ +FWRGN  NVIRYFPTQA NFAFKD  K +F     K  +F  +F  N+ASGG
Sbjct:    5 AISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADK--QYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGG 121          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT4_MOUSE (ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.992e-27
Identity = 62/117 (52.99%), Postives = 81/117 (69.23%), Query Frame = 2
Query:   29 SFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPK-YSPKKEFGMFFLTNMASGG 376
            SF  D  AGG++ AV+KTA APIERVKL++Q Q ++  I     ARY G+ +C  R+ +EQG  ++WRGN  NVIRYFPTQA NFAFKD  K +F    + +K+F  +FL N+ASGG
Sbjct:   20 SFSKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE--ARYKGMLDCLVRIPREQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKELFMSGVNKEKQFWRWFLANLASGG 134          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT2_PONAB (ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 1.992e-27
Identity = 63/120 (52.50%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   20 SASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKK-EFGMFFLTNMASGG 376
            +A SF  DF AGG++ A++KTA APIERVKL++Q Q A+  I + K  +Y GI +C  R+ +EQG+ +FWRGN  NVIR+FPTQA NFAFKD  K +F     K+ +F  +F  N+ASGG
Sbjct:    4 AAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADK--QYKGIIDCVVRIPKEQGVLSFWRGNLANVIRHFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGG 121          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT4_BOVIN (ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.601e-27
Identity = 62/119 (52.10%), Postives = 82/119 (68.91%), Query Frame = 2
Query:   23 ASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPK-YSPKKEFGMFFLTNMASGG 376
            A+SF  D  AGG++ AV+KT  APIERVKL++Q Q ++  I     A+Y GI +C  R+ +EQG  ++WRGN  NVIRYFPTQA NFAFKD  K +F    + +K+F  +FL N+ASGG
Sbjct:   21 ATSFGKDLLAGGVAAAVSKTTVAPIERVKLLLQVQASSKQISPE--AQYKGIVDCLVRIPREQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGG 137          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT_NEUCR (ADP,ATP carrier protein OS=Neurospora crassa GN=acp PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.885e-27
Identity = 61/125 (48.80%), Postives = 81/125 (64.80%), Query Frame = 2
Query:    5 EQKGPSASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKV-ARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            +QK      F+ DF  GG+S AV+KTA APIER+KL++Q QD   +I++G++  RY GI +CF R   ++G+ A WRGN  NVIRYFPTQA NFAF+D  K MF        +  +   N+ASGG
Sbjct:    4 QQKVLGMPPFVADFLMGGVSAAVSKTAAAPIERIKLLVQNQDE--MIRAGRLDRRYNGIIDCFKRTTADEGVMALWRGNTANVIRYFPTQALNFAFRDKFKKMFGYKKDVDGYWKWMAGNLASGG 126          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT1_YEAST (ADP,ATP carrier protein 1 OS=Saccharomyces cerevisiae GN=AAC1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.876e-26
Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 2
Query:   26 SSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKV-ARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            S F VDF  GG+S A+AKT  APIERVKL++Q Q+   ++K G +  RY GI +CF R    +G+ +FWRGN  NV+RYFPTQA NFAFKD IK +      +  +  +F  N+ SGG
Sbjct:   11 SHFGVDFLMGGVSAAIAKTGAAPIERVKLLMQNQEE--MLKQGSLDTRYKGILDCFKRTATHEGIVSFWRGNTANVLRYFPTQALNFAFKDKIKSLLSYDRERDGYAKWFAGNLFSGG 126          
The following BLAST results are available for this feature:
BLAST of CX300688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
ADT2_MOUSE5.242e-2853.33ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 P... [more]
ADT2_HUMAN5.242e-2853.33ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 P... [more]
ADT2_BOVIN5.242e-2853.33ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=... [more]
ADT3_PIG6.846e-2854.62ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=... [more]
ADT3_HUMAN6.846e-2854.62ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 P... [more]
ADT4_MOUSE1.992e-2752.99ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 ... [more]
ADT2_PONAB1.992e-2752.50ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 P... [more]
ADT4_BOVIN2.601e-2752.10ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE... [more]
ADT_NEUCR9.885e-2748.80ADP,ATP carrier protein OS=Neurospora crassa GN=ac... [more]
ADT1_YEAST2.876e-2650.00ADP,ATP carrier protein 1 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionC08001B07SK PhyRootSw1 Citrus sinensis cDNA clone C08001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300688 ID=CX300688; Name=CX300688; organism=Citrus sinensis; type=EST; length=377bp
GTCTGAACAAAAAGGTCCAAGCGCTTCTAGTTTCCTTGTTGACTTCGCTG
CCGGAGGTATCTCTGGTGCCGTTGCCAAGACTGCCACCGCTCCTATTGAG
AGAGTCAAGTTGATCATCCAGACCCAGGATGCCAACCCTTTAATCAAGTC
CGGCAAGGTCGCCAGATACACCGGTATTGGCAACTGCTTCACCCGTGTGT
ACCAGGAGCAAGGTTTAGCTGCTTTCTGGCGTGGTAACTTCACCAACGTC
ATCCGTTATTTCCCTACCCAGGCTTTCAACTTCGCCTTCAAGGATACCAT
CAAGGGTATGTTCCCAAAGTACAGCCCAAAGAAGGAGTTCGGTATGTTCT
TCCTTACTAACATGGCTTCCGGTGGTC
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