CX300688

Overview
NameCX300688
Unique NameCX300688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length377
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: CMC2_CAEEL (Putative calcium-binding mitochondrial carrier F55A11.4 OS=Caenorhabditis elegans GN=F55A11.4 PE=5 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.614e-11
Identity = 36/100 (36.00%), Postives = 54/100 (54.00%), Query Frame = 2
Query:   50 AGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMF 349
            AGG +GAV++T TAP +R+K+ +Q       + S K  R  G+ +C   ++ E G+ +FWRGN  NVI+  P  A  F   D +K +  K    +E   F
Sbjct:  254 AGGAAGAVSRTCTAPFDRIKVYLQ-------VNSSKTNRL-GVMSCLKLLHAEGGIKSFWRGNGINVIKIAPESAIKFMCYDQLKRLIQKKKGNEEISTF 345          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: EAAC_ARATH (Probable envelope ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=EAAC PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.822e-11
Identity = 34/90 (37.78%), Postives = 51/90 (56.67%), Query Frame = 2
Query:   44 FAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMF 313
            FAAG ++GA AKT TAP++R+KL++QT       +S K A   G     T + +E+G+  +W+GN   VIR  P  A      ++ K +F
Sbjct:   91 FAAGALAGAAAKTVTAPLDRIKLLMQTHGIRLGQQSAKKA--IGFIEAITLIAKEEGVKGYWKGNLPQVIRVLPYSAVQLLAYESYKNLF 178          
The following BLAST results are available for this feature:
BLAST of CX300688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CMC2_CAEEL2.614e-1136.00Putative calcium-binding mitochondrial carrier F55... [more]
EAAC_ARATH5.822e-1137.78Probable envelope ADP,ATP carrier protein, chlorop... [more]

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Properties
Property NameValue
Genbank descriptionC08001B07SK PhyRootSw1 Citrus sinensis cDNA clone C08001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300688 ID=CX300688; Name=CX300688; organism=Citrus sinensis; type=EST; length=377bp
GTCTGAACAAAAAGGTCCAAGCGCTTCTAGTTTCCTTGTTGACTTCGCTG
CCGGAGGTATCTCTGGTGCCGTTGCCAAGACTGCCACCGCTCCTATTGAG
AGAGTCAAGTTGATCATCCAGACCCAGGATGCCAACCCTTTAATCAAGTC
CGGCAAGGTCGCCAGATACACCGGTATTGGCAACTGCTTCACCCGTGTGT
ACCAGGAGCAAGGTTTAGCTGCTTTCTGGCGTGGTAACTTCACCAACGTC
ATCCGTTATTTCCCTACCCAGGCTTTCAACTTCGCCTTCAAGGATACCAT
CAAGGGTATGTTCCCAAAGTACAGCCCAAAGAAGGAGTTCGGTATGTTCT
TCCTTACTAACATGGCTTCCGGTGGTC
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