CK939686
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939686 vs. ExPASy Swiss-Prot
Match: ATPH_AGRST (ATP synthase subunit c, chloroplastic OS=Agrostis stolonifera GN=atpH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.256e-25 Identity = 64/81 (79.01%), Postives = 65/81 (80.25%), Query Frame = 3 Query: 60 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 302 MNPLI+AASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV Sbjct: 1 MNPLIAAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 81
BLAST of CK939686 vs. ExPASy Swiss-Prot
Match: ATPH_GOSBA (ATP synthase subunit c, chloroplastic OS=Gossypium barbadense GN=atpH PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.170e-25 Identity = 64/81 (79.01%), Postives = 65/81 (80.25%), Query Frame = 3 Query: 60 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 302 MNPLISAASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEAL+IYGLVVALALLFANPFV Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALSIYGLVVALALLFANPFV 81
BLAST of CK939686 vs. ExPASy Swiss-Prot
Match: ATPH_IPOPU (ATP synthase subunit c, chloroplastic OS=Ipomoea purpurea GN=atpH PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.067e-24 Identity = 64/81 (79.01%), Postives = 65/81 (80.25%), Query Frame = 3 Query: 60 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 302 M+PLISAASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV Sbjct: 1 MDPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 81
BLAST of CK939686 vs. ExPASy Swiss-Prot
Match: ATPH_CYCTA (ATP synthase subunit c, chloroplastic OS=Cycas taitungensis GN=atpH PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.067e-24 Identity = 64/81 (79.01%), Postives = 64/81 (79.01%), Query Frame = 3 Query: 60 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 302 MNPLI AASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV Sbjct: 1 MNPLIPAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 81
BLAST of CK939686 vs. ExPASy Swiss-Prot
Match: ATPH_ANGEV (ATP synthase subunit c, chloroplastic OS=Angiopteris evecta GN=atpH PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.394e-24 Identity = 64/81 (79.01%), Postives = 64/81 (79.01%), Query Frame = 3 Query: 60 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 302 MNPLISAASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALAL FANPFV Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALSFANPFV 81
BLAST of CK939686 vs. ExPASy Swiss-Prot
Match: ATPH_HUPLU (ATP synthase subunit c, chloroplastic OS=Huperzia lucidula GN=atpH PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.820e-24 Identity = 64/81 (79.01%), Postives = 64/81 (79.01%), Query Frame = 3 Query: 60 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 302 MNPLISAASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALAL FANPFV Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALPFANPFV 81
BLAST of CK939686 vs. ExPASy Swiss-Prot
Match: ATPH_CUSOB (ATP synthase subunit C, plastid OS=Cuscuta obtusiflora GN=atpE PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.820e-24 Identity = 62/81 (76.54%), Postives = 64/81 (79.01%), Query Frame = 3 Query: 60 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 302 MNP+ISAASVIAAG AVGLASI IARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPF+ Sbjct: 1 MNPIISAASVIAAGFAVGLASIGPGIGQGTAAGRAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFI 81
BLAST of CK939686 vs. ExPASy Swiss-Prot
Match: ATPH_CUSGR (ATP synthase subunit C, plastid OS=Cuscuta gronovii GN=atpE PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.820e-24 Identity = 62/81 (76.54%), Postives = 64/81 (79.01%), Query Frame = 3 Query: 60 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 302 MNP+ISAASVIAAG AVGLASI IARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPF+ Sbjct: 1 MNPIISAASVIAAGFAVGLASIGPGIGQGTAAGRAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFI 81
BLAST of CK939686 vs. ExPASy Swiss-Prot
Match: ATPH_CHLAT (ATP synthase subunit c, chloroplastic OS=Chlorokybus atmophyticus GN=atpH PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 1.820e-24 Identity = 63/81 (77.78%), Postives = 65/81 (80.25%), Query Frame = 3 Query: 60 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 302 M+PLISAASV+AAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV Sbjct: 1 MSPLISAASVLAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 81
BLAST of CK939686 vs. ExPASy Swiss-Prot
Match: ATPH_ATRBE (ATP synthase subunit c, chloroplastic OS=Atropa belladonna GN=atpH PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.820e-24 Identity = 63/81 (77.78%), Postives = 64/81 (79.01%), Query Frame = 3 Query: 60 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 302 MNPL+ AASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV Sbjct: 1 MNPLVFAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 81 The following BLAST results are available for this feature:
BLAST of CK939686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939686 ID=CK939686; Name=CK939686; organism=Citrus sinensis; type=EST; length=624bpback to top |