CK939684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_LEPVR (30S ribosomal protein S19, chloroplastic OS=Lepidium virginicum GN=rps19 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.058e-33 Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE IITWSRASTIIPTM+GHTIAIHNGREHLP+YI D MVGHKLGEF+PTINFRGHAKNDNRSRR Sbjct: 18 KIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPVYIIDLMVGHKLGEFSPTINFRGHAKNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CRUWA (30S ribosomal protein S19, chloroplastic OS=Crucihimalaya wallichii GN=rps19 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.058e-33 Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE IITWSRASTIIPTM+GHTIAIHNGREHLP+YI D MVGHKLGEF+PTINFRGHAKNDNRSRR Sbjct: 18 KIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPVYIIDLMVGHKLGEFSPTINFRGHAKNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CAPBU (30S ribosomal protein S19, chloroplastic OS=Capsella bursa-pastoris GN=rps19 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.058e-33 Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE IITWSRASTIIPTM+GHTIAIHNGREHLP+YI D MVGHKLGEF+PTINFRGHAKNDNRSRR Sbjct: 18 KIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPVYIIDLMVGHKLGEFSPTINFRGHAKNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_BARVE (30S ribosomal protein S19, chloroplastic OS=Barbarea verna GN=rps19 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.058e-33 Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE IITWSRASTIIPTM+GHTIAIHNGREHLP+YI D MVGHKLGEF+PTINFRGHAKNDNRSRR Sbjct: 18 KIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPVYIIDLMVGHKLGEFSPTINFRGHAKNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_ARATH (30S ribosomal protein S19, chloroplastic OS=Arabidopsis thaliana GN=rps19 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.058e-33 Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE IITWSRASTIIPTM+GHTIAIHNGREHLP+YI D MVGHKLGEF+PTINFRGHAKNDNRSRR Sbjct: 18 KIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPVYIIDLMVGHKLGEFSPTINFRGHAKNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_ARAHI (30S ribosomal protein S19, chloroplastic OS=Arabis hirsuta GN=rps19 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.058e-33 Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE IITWSRASTIIPTM+GHTIAIHNGREHLP+YI D MVGHKLGEF+PTINFRGHAKNDNRSRR Sbjct: 18 KIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPVYIIDLMVGHKLGEFSPTINFRGHAKNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_NICBI (30S ribosomal protein S19, chloroplastic OS=Nicotiana bigelovii GN=rps19 PE=3 SV=5) HSP 1 Score: 140.198 bits (352), Expect = 3.078e-33 Identity = 64/75 (85.33%), Postives = 70/75 (93.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KIDKLNTKAE I+TWSRASTIIPT +GHTIAIHNG+EHLPIYIT+ MVGHKLGEFAPT+NFRGHAK+DNRSRR Sbjct: 18 KIDKLNTKAEKEIIVTWSRASTIIPTXIGHTIAIHNGKEHLPIYITBSMVGHKLGEFAPTLNFRGHAKSDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_HELAN (30S ribosomal protein S19, chloroplastic OS=Helianthus annuus GN=rps19 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.078e-33 Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTK E IITWSRASTIIP MVGHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT+NFRGHAK+DNRSRR Sbjct: 18 KINKLNTKEEKEIIITWSRASTIIPIMVGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTLNFRGHAKSDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_GUIAB (30S ribosomal protein S19, chloroplastic OS=Guizotia abyssinica GN=rps19 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.078e-33 Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTK E IITWSRASTIIP MVGHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT+NFRGHAK+DNRSRR Sbjct: 18 KINKLNTKEEKEIIITWSRASTIIPIMVGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTLNFRGHAKSDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_ILLOL (30S ribosomal protein S19, chloroplastic OS=Illicium oligandrum GN=rps19 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.251e-33 Identity = 63/76 (82.89%), Postives = 70/76 (92.11%), Query Frame = 1 Query: 4 GKIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 GKI+KLN + E I+TWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT+ FRGHA+NDNRSRR Sbjct: 17 GKIEKLNMREEKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTLTFRGHARNDNRSRR 92 The following BLAST results are available for this feature:
BLAST of CK939684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939684 ID=CK939684; Name=CK939684; organism=Citrus sinensis; type=EST; length=287bpback to top |