CK939684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_DRANE (30S ribosomal protein S19, chloroplastic OS=Draba nemorosa GN=rps19 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.251e-33 Identity = 65/75 (86.67%), Postives = 69/75 (92.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE IITWSRASTIIPTM+GHTIAIHNGREHLP+YI D MVGHKLGEF+PTINFRGHAKND RSRR Sbjct: 18 KIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPVYIIDLMVGHKLGEFSPTINFRGHAKNDTRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_LOBMA (30S ribosomal protein S19, chloroplastic OS=Lobularia maritima GN=rps19 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 6.858e-33 Identity = 65/75 (86.67%), Postives = 69/75 (92.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE I TWSRASTIIPTM+GHTIAIHNGREHLP+YI D MVGHKLGEF+PTINFRGHAKNDNRSRR Sbjct: 18 KIEKLNTKAEKEIIRTWSRASTIIPTMIGHTIAIHNGREHLPVYIIDLMVGHKLGEFSPTINFRGHAKNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CUCSA (30S ribosomal protein S19, chloroplastic OS=Cucumis sativus GN=rps19 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 8.957e-33 Identity = 62/75 (82.67%), Postives = 69/75 (92.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTK E I+TWSRASTIIPTM+GHTIA+HNG++HLP+YITDRMVGHKLGEFAPT NFRGH KNDNRSRR Sbjct: 18 KINKLNTKGEKEIIVTWSRASTIIPTMIGHTIAVHNGKDHLPVYITDRMVGHKLGEFAPTRNFRGHVKNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_LOTJA (30S ribosomal protein S19, chloroplastic OS=Lotus japonicus GN=rps19 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.528e-32 Identity = 62/75 (82.67%), Postives = 69/75 (92.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+ LNTK+E IITWSR STIIP M+GHTIAIHNG+EHLPIY+TDRMVGHKLGEF+PT+NFRGHAKNDNRSRR Sbjct: 18 KINNLNTKSEKEIIITWSRTSTIIPAMIGHTIAIHNGKEHLPIYVTDRMVGHKLGEFSPTLNFRGHAKNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_LIRTU (30S ribosomal protein S19, chloroplastic OS=Liriodendron tulipifera GN=rps19 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.995e-32 Identity = 62/76 (81.58%), Postives = 70/76 (92.11%), Query Frame = 1 Query: 4 GKIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 GKI+KLN + E IITWSRASTIIPTM+GHTIAIHNG++HLPIYITDRMVGHKLGEFAPT+ F+GHA+NDNRSRR Sbjct: 17 GKIEKLNMREEKEIIITWSRASTIIPTMIGHTIAIHNGKDHLPIYITDRMVGHKLGEFAPTLTFKGHARNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_ACOCL (30S ribosomal protein S19, chloroplastic OS=Acorus calamus GN=rps19 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.606e-32 Identity = 62/75 (82.67%), Postives = 69/75 (92.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLN K E I+TWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT+ FRGHA+NDN+SRR Sbjct: 18 KIEKLNMKEEKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTLTFRGHARNDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CHLSC (30S ribosomal protein S19, chloroplastic OS=Chloranthus spicatus GN=rps19 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.404e-32 Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 K++KLN + E I+TWSR+STIIPTM+GHTIAIHNGREHLPIYITDRMVGHKLGEFAPT+ FRGHA+NDNRSRR Sbjct: 18 KVEKLNMREEKKIIVTWSRSSTIIPTMIGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTLTFRGHARNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CICAR (30S ribosomal protein S19, chloroplastic OS=Cicer arietinum GN=rps19 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.445e-32 Identity = 63/75 (84.00%), Postives = 69/75 (92.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTK E IITWSRASTIIPTM+GHTIAIHNGREHLPIYITDRMVGHKLGEF+PT+ FRG+AKND +SRR Sbjct: 18 KINKLNTKGEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPIYITDRMVGHKLGEFSPTLTFRGYAKNDTKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_PIPCE (30S ribosomal protein S19, chloroplastic OS=Piper cenocladum GN=rps19 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 5.806e-32 Identity = 62/75 (82.67%), Postives = 68/75 (90.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLN K I+TWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT+ FRGHA+NDNRSRR Sbjct: 18 KIEKLNMKGGKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTLTFRGHARNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CERDE (30S ribosomal protein S19, chloroplastic OS=Ceratophyllum demersum GN=rps19 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.293e-31 Identity = 59/75 (78.67%), Postives = 69/75 (92.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 K++KLN + E I+TWSRASTIIPTMVGHTIA+HNG+EHLP++ITDRMVGHKLGEFAPT+ FRGHA+NDNRSRR Sbjct: 18 KVEKLNIRKEKEIIVTWSRASTIIPTMVGHTIAVHNGKEHLPVFITDRMVGHKLGEFAPTLTFRGHARNDNRSRR 92 The following BLAST results are available for this feature:
BLAST of CK939684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939684 ID=CK939684; Name=CK939684; organism=Citrus sinensis; type=EST; length=287bpback to top |