CK939684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_COLP3 (30S ribosomal protein S19 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=rpsS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.142e-18 Identity = 38/66 (57.58%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGH 204 K++K I TWSR S IIPTM+G TIA+HNGR+H+P+++T+ M+GHKLGEFAPT +RGH Sbjct: 18 KVEKAVESGNKKPIKTWSRRSMIIPTMIGLTIAVHNGRQHVPVFVTEEMIGHKLGEFAPTRTYRGH 83
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_PROVI (30S ribosomal protein S19 OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=rpsS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.797e-18 Identity = 37/63 (58.73%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 19 LNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 207 +N++ E + TW R+S I P VGHTIA+HNG+ H+P+Y++D MVGHKLGEFAPT +RGHA Sbjct: 22 MNSRGEKKVLKTWCRSSMISPDFVGHTIAVHNGKTHVPVYVSDNMVGHKLGEFAPTRTYRGHA 84
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_PHYAS (30S ribosomal protein S19 OS=Phytoplasma australiense GN=rpsS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.797e-18 Identity = 41/75 (54.67%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+K I TWSR+S I P VGH IA++NGREH+PIYIT+ MVGHKLGEF T +RGH K D + ++ Sbjct: 18 KIEKQKNLKNKKVIQTWSRSSMITPVFVGHKIAVYNGREHIPIYITENMVGHKLGEFFSTRTYRGHNKKDKKGQK 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_LACLS (30S ribosomal protein S19 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=rpsS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.797e-18 Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 1 Query: 25 TKAEXXXII-TWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 T AE +I TWSR STI P VG TIA+++GR+H+P+Y+ + MVGHKLGEFAPT +RGHA +D ++RR Sbjct: 23 TNAERKSVIKTWSRRSTIFPNFVGLTIAVYDGRKHVPVYVQEDMVGHKLGEFAPTRTYRGHAADDKKTRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_LACLM (30S ribosomal protein S19 OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rpsS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.797e-18 Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 1 Query: 25 TKAEXXXII-TWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 T AE +I TWSR STI P VG TIA+++GR+H+P+Y+ + MVGHKLGEFAPT +RGHA +D ++RR Sbjct: 23 TNAERKSVIKTWSRRSTIFPNFVGLTIAVYDGRKHVPVYVQEDMVGHKLGEFAPTRTYRGHAADDKKTRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_BLOFL (30S ribosomal protein S19 OS=Blochmannia floridanus GN=rpsS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.797e-18 Identity = 38/75 (50.67%), Postives = 55/75 (73.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 K++K+ + I TWSR STI P M+G TI++HNG++H+P++I+D MVGHKLGEFAPT +RGH+ + +R Sbjct: 18 KVEKVIKTGDKKPIRTWSRRSTIFPKMIGLTISVHNGKQHIPVFISDEMVGHKLGEFAPTRTYRGHSVDKKIKKR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_BACV8 (30S ribosomal protein S19 OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=rpsS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.797e-18 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNR 222 K+ +N + + TW+RAS I P VGHT+A+HNG + +P+Y+T+ MVGHKLGEFAPT FRGHA N + Sbjct: 18 KVLAMNESGKKVVVKTWARASMISPDFVGHTVAVHNGNKFIPVYVTENMVGHKLGEFAPTRTFRGHAGNKKK 89
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_BACSK (30S ribosomal protein S19 OS=Bacillus clausii (strain KSM-K16) GN=rpsS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.797e-18 Identity = 38/75 (50.67%), Postives = 56/75 (74.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 K++ LN + + TWSR STI P +GHT A+++GR+H+P+Y+++ MVGHKLGEFAPT ++GHA D ++RR Sbjct: 18 KVEALNATNDKKVVKTWSRRSTIFPDFIGHTFAVYDGRKHVPVYVSEDMVGHKLGEFAPTRTYKGHAA-DKKTRR 91
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_THEM4 (30S ribosomal protein S19 OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rpsS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.653e-18 Identity = 41/67 (61.19%), Postives = 51/67 (76.12%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 207 KI +LN E I TWSRAS I+P MVGHTIA++NG +H+P+YIT+ MVGH+LGEF+ T F GHA Sbjct: 18 KIKQLNEAGEKKIIKTWSRASMIVPEMVGHTIAVYNGLKHIPVYITENMVGHRLGEFSFTRRFGGHA 84
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_STRZT (30S ribosomal protein S19 OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=rpsS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.653e-18 Identity = 38/75 (50.67%), Postives = 56/75 (74.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 K++ + I TWSR STI P+ +G+TIA+++GR+H+P+YI + MVGHKLGEFAPT ++GHA +D ++RR Sbjct: 18 KVEAQANDEKKKVIKTWSRRSTIFPSFIGYTIAVYDGRKHVPVYIQEDMVGHKLGEFAPTRTYKGHAADDKKTRR 92 The following BLAST results are available for this feature:
BLAST of CK939684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939684 ID=CK939684; Name=CK939684; organism=Citrus sinensis; type=EST; length=287bpback to top |