CK939684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_BUXMI (30S ribosomal protein S19, chloroplastic OS=Buxus microphylla GN=rps19 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.206e-31 Identity = 60/75 (80.00%), Postives = 70/75 (93.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLN +A+ I+TWSRASTIIPTM+GHTIAIHNG+EHLPI+ITDRMVGHKLGEFAPT+NFR HA+NDN+SRR Sbjct: 18 KIEKLNMRAKKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPIFITDRMVGHKLGEFAPTLNFREHARNDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_NANDO (30S ribosomal protein S19, chloroplastic OS=Nandina domestica GN=rps19 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.095e-30 Identity = 59/76 (77.63%), Postives = 68/76 (89.47%), Query Frame = 1 Query: 4 GKIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 GKI+KLN +AE I+TWSRASTIIP M+GHTIAIHNG+EHLPIYIT+ MVGHKLGEFAPT+ FRGHA+ND +SRR Sbjct: 17 GKIEKLNMRAEKEIIVTWSRASTIIPIMIGHTIAIHNGKEHLPIYITESMVGHKLGEFAPTLTFRGHARNDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_MARPO (30S ribosomal protein S19, chloroplastic OS=Marchantia polymorpha GN=rps19 PE=3 SV=3) HSP 1 Score: 131.339 bits (329), Expect = 1.430e-30 Identity = 60/75 (80.00%), Postives = 66/75 (88.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+ LN K E IITWSRASTI+PTM+GHTIA+HNG+EHLPIYITDRMVGHKLGEFAPT FRGHAKND +SRR Sbjct: 18 KIENLNLKKEKKIIITWSRASTIVPTMIGHTIAVHNGQEHLPIYITDRMVGHKLGEFAPTRTFRGHAKNDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_IPOPU (30S ribosomal protein S19, chloroplastic OS=Ipomoea purpurea GN=rps19 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.868e-30 Identity = 61/75 (81.33%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KIDKLN KAE I TWSR STIIPTM+GHTIAIHNG+EHLPIYITD MVGHKLGEFA T NFRGH K+DN+SRR Sbjct: 18 KIDKLNRKAEKEIIRTWSRGSTIIPTMIGHTIAIHNGKEHLPIYITDHMVGHKLGEFASTFNFRGHTKSDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CALFG (30S ribosomal protein S19, chloroplastic OS=Calycanthus floridus var. glaucus GN=rps19 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.868e-30 Identity = 59/75 (78.67%), Postives = 67/75 (89.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLN + E I+TWSRASTIIPTM+GHTIAIHNG+EHLPI+ITDRMVGHKLGEFAPT+ FRGHA+ D RSRR Sbjct: 18 KIEKLNMREEKETIVTWSRASTIIPTMIGHTIAIHNGKEHLPIFITDRMVGHKLGEFAPTLTFRGHARTDTRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_AMBTC (30S ribosomal protein S19, chloroplastic OS=Amborella trichopoda GN=rps19 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.439e-30 Identity = 57/75 (76.00%), Postives = 68/75 (90.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI KLNT+ E I+TWSRASTIIPTM+GHTIAIHNG+EHLP+Y+TDRMVGHKLGEFAPT+ F+GHA+ND++ RR Sbjct: 18 KIHKLNTREEKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPVYVTDRMVGHKLGEFAPTLTFQGHARNDSKFRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_DRIGR (30S ribosomal protein S19, chloroplastic OS=Drimys granadensis GN=rps19 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.161e-30 Identity = 59/76 (77.63%), Postives = 67/76 (88.16%), Query Frame = 1 Query: 4 GKIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 GKI+KLN + E I+TWSRASTIIPTM+GHTIAIHNG+ HLPIYI DRMVGHKLGEFAPT+ FRGHA+N+N SRR Sbjct: 17 GKIEKLNMREEKEIIVTWSRASTIIPTMIGHTIAIHNGKAHLPIYIIDRMVGHKLGEFAPTLTFRGHARNNNVSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CUSEX (30S ribosomal protein S19, plastid OS=Cuscuta exaltata GN=rps19 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.161e-30 Identity = 62/75 (82.67%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KIDKLN KAE IITWSR STIIP MVGHTIAIH G+EHLPIYI D MVGHKLGEFA T NFRGHAK+DNRSRR Sbjct: 18 KIDKLNIKAEKEIIITWSRGSTIIPIMVGHTIAIHTGKEHLPIYIMDHMVGHKLGEFASTFNFRGHAKSDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_VITVI (30S ribosomal protein S19, chloroplastic OS=Vitis vinifera GN=rps19 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.434e-30 Identity = 59/75 (78.67%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI LNT E I+TWSR STIIPTM+GHTIA+HNG+EH PIYITDRMVGHKLGEF+ T+NFRGHAKNDNRSRR Sbjct: 18 KIAMLNTTWEKEIIVTWSRTSTIIPTMIGHTIAVHNGKEHFPIYITDRMVGHKLGEFSSTLNFRGHAKNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_EPIVI (Plastid 30S ribosomal protein S19 OS=Epifagus virginiana GN=rps19 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.097e-30 Identity = 58/75 (77.33%), Postives = 66/75 (88.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLN K + I+TWSRASTIIP M+GH I+IHNG+EHLPIYITD MVGHKLGEF PT+NFRGHAK+DNRSRR Sbjct: 20 KINKLNNKKKKEIIVTWSRASTIIPIMIGHMISIHNGKEHLPIYITDHMVGHKLGEFVPTLNFRGHAKSDNRSRR 94 The following BLAST results are available for this feature:
BLAST of CK939684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939684 ID=CK939684; Name=CK939684; organism=Citrus sinensis; type=EST; length=287bpback to top |