CK939684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_PHAAO (30S ribosomal protein S19, chloroplastic OS=Phalaenopsis aphrodite subsp. formosana GN=rps19 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.269e-30 Identity = 58/76 (76.32%), Postives = 67/76 (88.16%), Query Frame = 1 Query: 4 GKIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 G+I+KLN + E I+TWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT+ F HA+ND +SRR Sbjct: 17 GRIEKLNRREEKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTLTFVRHARNDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_NYMAL (30S ribosomal protein S19, chloroplastic OS=Nymphaea alba GN=rps19 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.211e-29 Identity = 59/75 (78.67%), Postives = 66/75 (88.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLN E I+TWSRASTII MVGHTIA+HNG+EHLPIYIT+RMVGHKLGEFAPT+ FRGHA+NDNRSRR Sbjct: 18 KIEKLNKAEERSIIVTWSRASTIIFAMVGHTIAVHNGKEHLPIYITERMVGHKLGEFAPTLTFRGHARNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_PEA (30S ribosomal protein S19, chloroplastic OS=Pisum sativum GN=rps19 PE=3 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 1.581e-29 Identity = 59/75 (78.67%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI KLNTK E I TWSR STIIP M+GHTIAIHNG+EHLP+YITDRMVGHKLGEF+PT+NF G AKNDN+SRR Sbjct: 18 KIKKLNTKGEKAIIKTWSRKSTIIPIMIGHTIAIHNGKEHLPVYITDRMVGHKLGEFSPTLNFGGFAKNDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CYCTA (30S ribosomal protein S19, chloroplastic OS=Cycas taitungensis GN=rps19 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.581e-29 Identity = 58/75 (77.33%), Postives = 66/75 (88.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+ LN K E I+TWSRASTI+P M+GHTIA+HNG+EHLPIYITDRMVGHKLGEFAPT+ RGHAK+DNRSRR Sbjct: 18 KIENLNIKKEKKIIVTWSRASTIVPAMIGHTIAVHNGKEHLPIYITDRMVGHKLGEFAPTLIPRGHAKSDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_PHYPA (30S ribosomal protein S19, chloroplastic OS=Physcomitrella patens GN=rps19 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.697e-29 Identity = 57/75 (76.00%), Postives = 66/75 (88.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+ LN K E IITWSRASTI+PTM+GHTIA++NG+EHLPIYITDRM+GHKLGEFAPT NFRGH K+D +SRR Sbjct: 18 KIEDLNLKKEKKIIITWSRASTIVPTMIGHTIAVYNGQEHLPIYITDRMIGHKLGEFAPTRNFRGHTKSDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_HUPLU (30S ribosomal protein S19, chloroplastic OS=Huperzia lucidula GN=rps19 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.600e-29 Identity = 57/75 (76.00%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+ LN + E I+TWSRASTI+P MVGHTIA+HNG+EHLPIY+TDRMVGHKLGEFAPT FRGHAKND +SRR Sbjct: 18 KIENLNVEEEKKIIVTWSRASTIVPIMVGHTIAVHNGQEHLPIYVTDRMVGHKLGEFAPTRIFRGHAKNDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_LEMMI (30S ribosomal protein S19, chloroplastic OS=Lemna minor GN=rps19 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.025e-28 Identity = 58/75 (77.33%), Postives = 66/75 (88.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLN + E I+TWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT +F HA+ND +SRR Sbjct: 18 KIEKLNMRQEKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTRSFGKHARNDIKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CUSGR (30S ribosomal protein S19, plastid OS=Cuscuta gronovii GN=rps19 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.025e-28 Identity = 58/75 (77.33%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLN KA+ IITWSR STIIP M+GHTIAIHNG+EHLPIYI D MVGHKLGEFA T+NFRGH K DN+SRR Sbjct: 18 KINKLNRKAQKEIIITWSRGSTIIPIMIGHTIAIHNGKEHLPIYIMDDMVGHKLGEFAATLNFRGHEKGDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CUSOB (30S ribosomal protein S19, plastid OS=Cuscuta obtusiflora GN=rps19 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.338e-28 Identity = 58/75 (77.33%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLN KA+ IITWSR STIIP M+GHTIAIHNG+EHLPIYI D MVGHKLGEFA T+NFRGH K DN+SRR Sbjct: 18 KINKLNRKAKKEIIITWSRGSTIIPIMIGHTIAIHNGKEHLPIYIMDDMVGHKLGEFAATLNFRGHEKGDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_OENPA (30S ribosomal protein S19, chloroplastic OS=Oenothera parviflora GN=rps19 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.283e-28 Identity = 58/75 (77.33%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 K++KLN + + I TWSRASTII TM+GHTIAIHNG+EHLPIYITD MVGHKLGEFAPTINF HAKNDN+SRR Sbjct: 18 KMEKLNRREDKILIRTWSRASTIILTMIGHTIAIHNGKEHLPIYITDYMVGHKLGEFAPTINFHEHAKNDNKSRR 92 The following BLAST results are available for this feature:
BLAST of CK939684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939684 ID=CK939684; Name=CK939684; organism=Citrus sinensis; type=EST; length=287bpback to top |