CK939684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_OENGL (30S ribosomal protein S19, chloroplastic OS=Oenothera glazioviana GN=rps19 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.283e-28 Identity = 58/75 (77.33%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 K++KLN + + I TWSRASTII TM+GHTIAIHNG+EHLPIYITD MVGHKLGEFAPTINF HAKNDN+SRR Sbjct: 18 KMEKLNRREDKILIRTWSRASTIILTMIGHTIAIHNGKEHLPIYITDYMVGHKLGEFAPTINFHEHAKNDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_OENEH (30S ribosomal protein S19, chloroplastic OS=Oenothera elata subsp. hookeri GN=rps19 PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 2.283e-28 Identity = 58/75 (77.33%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 K++KLN + + I TWSRASTII TM+GHTIAIHNG+EHLPIYITD MVGHKLGEFAPTINF HAKNDN+SRR Sbjct: 18 KMEKLNRREDKILIRTWSRASTIILTMIGHTIAIHNGKEHLPIYITDYMVGHKLGEFAPTINFHEHAKNDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_OENBI (30S ribosomal protein S19, chloroplastic OS=Oenothera biennis GN=rps19 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.283e-28 Identity = 58/75 (77.33%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 K++KLN + + I TWSRASTII TM+GHTIAIHNG+EHLPIYITD MVGHKLGEFAPTINF HAKNDN+SRR Sbjct: 18 KMEKLNRREDKILIRTWSRASTIILTMIGHTIAIHNGKEHLPIYITDYMVGHKLGEFAPTINFHEHAKNDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_OENAR (30S ribosomal protein S19, chloroplastic OS=Oenothera argillicola GN=rps19 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.283e-28 Identity = 58/75 (77.33%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 K++KLN + + I TWSRASTII TM+GHTIAIHNG+EHLPIYITD MVGHKLGEFAPTINF HAKNDN+SRR Sbjct: 18 KMEKLNRREDKILIRTWSRASTIILTMIGHTIAIHNGKEHLPIYITDYMVGHKLGEFAPTINFHEHAKNDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CUSRE (30S ribosomal protein S19, plastid OS=Cuscuta reflexa GN=rps19 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.283e-28 Identity = 60/75 (80.00%), Postives = 62/75 (82.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI KLN K E IITWSR STIIP MVGHTIAIH G+EHLPIYI D MVGHKLGEFA T+NFRGHAK DNRSRR Sbjct: 18 KIYKLNIKTEKEIIITWSRGSTIIPIMVGHTIAIHTGKEHLPIYIMDHMVGHKLGEFAFTLNFRGHAKTDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_PICAB (30S ribosomal protein S19, chloroplastic OS=Picea abies GN=rps19 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.086e-28 Identity = 54/75 (72.00%), Postives = 63/75 (84.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI LN K E I+TWSRAS I+P M+GHTIA+HNGREHLPIY+TDRMV HKLGEFAPT+ F+GHA+ND +SRR Sbjct: 18 KIQNLNIKEEKKIIVTWSRASVIVPAMIGHTIAVHNGREHLPIYVTDRMVDHKLGEFAPTLLFQGHARNDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_DIOEL (30S ribosomal protein S19, chloroplastic OS=Dioscorea elephantipes GN=rps19 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.086e-28 Identity = 54/76 (71.05%), Postives = 64/76 (84.21%), Query Frame = 1 Query: 4 GKIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 GKI+KLN + E I+TWSR STIIP M+GHTIAIHNG+EH PIYITD+MVGHKLGEF+PT+ F H +NDN+SRR Sbjct: 17 GKIEKLNMREEKEIIVTWSRGSTIIPAMMGHTIAIHNGKEHFPIYITDQMVGHKLGEFSPTLTFARHTRNDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_PINTH (30S ribosomal protein S19, chloroplastic OS=Pinus thunbergii GN=rps19 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.642e-28 Identity = 54/75 (72.00%), Postives = 63/75 (84.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI LN K E I+TWSRAS I+P M+GHTIA+HNGREHLPIY+TDRMV HKLGEFAPT+ F+GHA+ND +SRR Sbjct: 18 KIKNLNIKEEKKIIVTWSRASVIVPAMIGHTIAVHNGREHLPIYVTDRMVDHKLGEFAPTLLFQGHARNDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_PINKO (30S ribosomal protein S19, chloroplastic OS=Pinus koraiensis GN=rps19 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.642e-28 Identity = 54/75 (72.00%), Postives = 63/75 (84.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI LN K E I+TWSRAS I+P M+GHTIA+HNGREHLPIY+TDRMV HKLGEFAPT+ F+GHA+ND +SRR Sbjct: 18 KIKNLNIKKEKKIIVTWSRASVIVPAMIGHTIAVHNGREHLPIYVTDRMVDHKLGEFAPTLLFQGHARNDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_STAPU (30S ribosomal protein S19, chloroplastic OS=Staurastrum punctulatum GN=rps19 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.675e-28 Identity = 55/75 (73.33%), Postives = 63/75 (84.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+ LN + E IITWSRAS I+P M+GHTIA+HNGREHLP+YITD MVGHKLGEFAPT FRGHAK+D +SRR Sbjct: 18 KIESLNAQGEKKVIITWSRASIIVPGMIGHTIAVHNGREHLPVYITDLMVGHKLGEFAPTRTFRGHAKSDKKSRR 92 The following BLAST results are available for this feature:
BLAST of CK939684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939684 ID=CK939684; Name=CK939684; organism=Citrus sinensis; type=EST; length=287bpback to top |