CK939684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_ANEMR (30S ribosomal protein S19, plastid OS=Aneura mirabilis GN=rps19 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.675e-28 Identity = 55/75 (73.33%), Postives = 63/75 (84.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 +I+ LN ++TWSRASTI+P M+GHTIAIHNGREHLPIYITDRMVGHKLGEFAPT FRGHA+ND +SRR Sbjct: 18 EIEILNFGGSEEVVVTWSRASTIVPVMIGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTRTFRGHARNDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CHAGL (30S ribosomal protein S19, chloroplastic OS=Chaetosphaeridium globosum GN=rps19 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.480e-27 Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+ LN K E IITWSRASTI+P M+GHTIA+HNGREHLP+++TDRMVG KLGEF+PT FRGH K+D +SRR Sbjct: 18 KIENLNAKGEKKVIITWSRASTIVPMMIGHTIAVHNGREHLPVFVTDRMVGQKLGEFSPTRTFRGHVKSDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_ANTFO (30S ribosomal protein S19, chloroplastic OS=Anthoceros formosae GN=rps19 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.297e-27 Identity = 55/75 (73.33%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+ LN K E I+TWSRASTI+PTM+GHTIA++NG+EHLPIYITDRMVGHKLGEFA T F+GHAK+D +SRR Sbjct: 18 KIEDLNIKREKKIIVTWSRASTIVPTMIGHTIAVYNGQEHLPIYITDRMVGHKLGEFALTRVFKGHAKSDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_SPIMX (30S ribosomal protein S19, chloroplastic OS=Spirogyra maxima GN=rps19 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.592e-27 Identity = 51/75 (68.00%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+ LN++ E I+TWSR STI+P M+GHTIA++NGREHLPI++TD MVGHKLGEF+PT FRGHAK+D +SRR Sbjct: 18 KIENLNSQGEKRVIVTWSRGSTIVPAMIGHTIAVYNGREHLPIFVTDLMVGHKLGEFSPTRTFRGHAKSDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_PSINU (30S ribosomal protein S19, chloroplastic OS=Psilotum nudum GN=rps19 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.592e-27 Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+ LN K E IITWSRASTI+P M+GHTIA++NGREHLPIY+TDRMVGHKLGEF T FRGHA+ D +SRR Sbjct: 18 KIESLNIKKEKRVIITWSRASTIVPGMIGHTIAVYNGREHLPIYVTDRMVGHKLGEFVLTRTFRGHARKDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_CYAP8 (30S ribosomal protein S19 OS=Cyanothece sp. (strain PCC 8801) GN=rpsS PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26 Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLN K + I TWSRASTI+P MVGHTIA+HNG++H+P+Y++++MVGHKLGEFAPT FRGHAK+D +SRR Sbjct: 18 KIEKLNEKGDKQVIKTWSRASTILPQMVGHTIAVHNGKQHVPVYVSEQMVGHKLGEFAPTRTFRGHAKSDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_CYAP7 (30S ribosomal protein S19 OS=Cyanothece sp. (strain PCC 7424) GN=rpsS PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26 Identity = 53/75 (70.67%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLN K E I TWSRASTIIP MVGHTIA+HNG++H+PI+I+++MVGHKLGEFAPT FRGHAK+D ++RR Sbjct: 18 KIEKLNEKGEKQVIKTWSRASTIIPDMVGHTIAVHNGKQHVPIFISEQMVGHKLGEFAPTRTFRGHAKSDKKARR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_MESVI (30S ribosomal protein S19, chloroplastic OS=Mesostigma viride GN=rps19 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26 Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+ LN K E I TWSR STI+P M+GHTIA+HNGREHLPI+ITD+MVGHKLGEF+PT FRGH K+D +SRR Sbjct: 18 KIEFLNVKKEKKVITTWSRGSTILPIMIGHTIAVHNGREHLPIFITDQMVGHKLGEFSPTRTFRGHTKSDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CHAVU (30S ribosomal protein S19, chloroplastic OS=Chara vulgaris GN=rps19 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26 Identity = 53/75 (70.67%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 K+ LN +A+ I+TWSR STIIP+M+GHTIAIHNGREH+PI+ITD+MVGHKLGEF+ T FRGHAKND +SRR Sbjct: 18 KVHILNLEAQKKVILTWSRGSTIIPSMIGHTIAIHNGREHIPIFITDQMVGHKLGEFSATRTFRGHAKNDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CHLVU (30S ribosomal protein S19, chloroplastic OS=Chlorella vulgaris GN=rps19 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.636e-26 Identity = 49/75 (65.33%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 K+++LNT+ + I TWSR+STI+P M+GHTIA+HNGREH+P++ITD+MVGHKLGEFAPT FRGH K D +S+R Sbjct: 18 KVERLNTQGDKKVIKTWSRSSTIVPLMIGHTIAVHNGREHIPVFITDQMVGHKLGEFAPTRTFRGHVKKDKKSKR 92 The following BLAST results are available for this feature:
BLAST of CK939684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939684 ID=CK939684; Name=CK939684; organism=Citrus sinensis; type=EST; length=287bpback to top |