CK939684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_ADICA (30S ribosomal protein S19, chloroplastic OS=Adiantum capillus-veneris GN=rps19 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 2.137e-26 Identity = 53/75 (70.67%), Postives = 61/75 (81.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 +I LN + + I TWSRAS I+P M+GHTIA+HNGREHLPIY+TDRMVGHKLGEF PT NFRGHAK+D SRR Sbjct: 18 EIRNLNIQKKRKLITTWSRASAIVPIMIGHTIAVHNGREHLPIYVTDRMVGHKLGEFVPTRNFRGHAKSDKGSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_OEDCA (30S ribosomal protein S19, chloroplastic OS=Oedogonium cardiacum GN=rps19 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.760e-26 Identity = 48/75 (64.00%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLN K + ++TWSR+STI+P M+GHTIA+HNGREH+P++ITD+MVGHKLGEF+ T +RGHAK D +S+R Sbjct: 18 KIEKLNNKGKKKVLVTWSRSSTIVPVMIGHTIAVHNGREHIPVFITDKMVGHKLGEFSLTRTYRGHAKTDKKSKR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_ANGEV (30S ribosomal protein S19, chloroplastic OS=Angiopteris evecta GN=rps19 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.217e-26 Identity = 52/75 (69.33%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+ LN + E I+T SRASTI+PTM+GHTIA++NG+EHLPIYITDRM+GHKLGEF PT FRGHA++D +SRR Sbjct: 18 KIENLNLRKEKKIIVTRSRASTIVPTMIGHTIAVYNGQEHLPIYITDRMIGHKLGEFVPTRIFRGHARSDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_CYAA5 (30S ribosomal protein S19 OS=Cyanothece sp. (strain ATCC 51142) GN=rpsS PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.120e-26 Identity = 50/75 (66.67%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLN K + I TWSRASTIIP M+GHTIA+HNG++H+PI+I+++MVGHKLGEFAPT FRGH+K D ++RR Sbjct: 18 KIEKLNEKGDKQVIKTWSRASTIIPAMIGHTIAVHNGKQHVPIFISEQMVGHKLGEFAPTRTFRGHSKGDKKARR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CYAPA (Cyanelle 30S ribosomal protein S19 OS=Cyanophora paradoxa GN=rps19 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.120e-26 Identity = 50/75 (66.67%), Postives = 63/75 (84.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 K++ LNT + I TWSRASTI+P MVGHTIA+HNGR+HLP++ITD+MVGHKLGEFAPT F+GH K+D ++RR Sbjct: 18 KVELLNTSGKTEVIKTWSRASTILPMMVGHTIAVHNGRQHLPVFITDQMVGHKLGEFAPTRTFKGHTKSDKKARR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_OLTVI (30S ribosomal protein S19, chloroplastic OS=Oltmannsiellopsis viridis GN=rps19 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.060e-25 Identity = 47/75 (62.67%), Postives = 63/75 (84.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 K++KLN + + I TWSRASTI+P M+GHTIA+HNGREH+P+++TD+MVGHKLGEFAPT FRGH +D +++R Sbjct: 18 KVEKLNAQNDKKVITTWSRASTIVPVMIGHTIAVHNGREHIPVFVTDQMVGHKLGEFAPTRTFRGHKNSDKKAKR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CHLAT (30S ribosomal protein S19, chloroplastic OS=Chlorokybus atmophyticus GN=rps19 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.060e-25 Identity = 50/75 (66.67%), Postives = 62/75 (82.67%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+ LN + E I TWSR STI+P M+GHTIA++NGREHLPI++TD+MVGHKLGEF+PT FRGH K+D +SRR Sbjct: 18 KIEYLNARREKQVITTWSRGSTIVPIMIGHTIAVYNGREHLPIFVTDQMVGHKLGEFSPTRTFRGHVKSDKKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_NEPOL (30S ribosomal protein S19, chloroplastic OS=Nephroselmis olivacea GN=rps19 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.809e-25 Identity = 51/75 (68.00%), Postives = 60/75 (80.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+K+N K E I TWSRASTIIP M+GHTIAIHNG+ HLPI+I DRM+GHKLGEF T N+RGH K D ++RR Sbjct: 18 KIEKMNGKGEKHVITTWSRASTIIPIMIGHTIAIHNGKSHLPIFINDRMIGHKLGEFVLTRNYRGHGKTDKKARR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_SYNP2 (30S ribosomal protein S19 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.362e-25 Identity = 48/75 (64.00%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLN + I TWSRASTI+P MVGHTIA+HNGR+H+P++++++MVGHKLGEFAPT F+GHAK+D ++RR Sbjct: 18 KIEKLNASGDKQVIKTWSRASTILPQMVGHTIAVHNGRQHVPVFVSEQMVGHKLGEFAPTRTFKGHAKSDKKARR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RS19_SYNY3 (30S ribosomal protein S19 OS=Synechocystis sp. (strain PCC 6803) GN=rpsS PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.030e-25 Identity = 47/75 (62.67%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KIDKLN K + + TWSRASTI+P MVGHTIA+HNGR+H+P++++++MVGHKLGEFAPT FR H+K+D ++R+ Sbjct: 18 KIDKLNDKGDKQVVKTWSRASTILPQMVGHTIAVHNGRQHVPVFVSEQMVGHKLGEFAPTRTFRSHSKSDKKARK 92 The following BLAST results are available for this feature:
BLAST of CK939684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939684 ID=CK939684; Name=CK939684; organism=Citrus sinensis; type=EST; length=287bpback to top |