CK939683

Overview
NameCK939683
Unique NameCK939683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_MOOTA (Imidazoleglycerol-phosphate dehydratase OS=Moorella thermoacetica (strain ATCC 39073) GN=hisB PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 7.191e-57
Identity = 102/190 (53.68%), Postives = 144/190 (75.79%), Query Frame = 1
Query:  187 VKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            ++R T ETN+ +K+ +DGSG    S+ IPF DH+L Q+A HGL D+ V A GD+ +D+HHT ED+G+ +G A+ +ALGD+KGI+R+G    P+DEAL+ V+LD SGRP+L + L++P  R+G+ +T+LVE F +++VN SG+TLH+RQLAG N+HH+ EA FKA  RA+RQA   DPR  G IPS+KG+L
Sbjct:    7 IERQTTETNIRLKVALDGSGTWQGSSGIPFFDHLLAQMARHGLLDLKVWAEGDLEVDNHHTVEDIGICLGQAVKKALGDKKGISRYGSALVPMDEALVLVALDFSGRPYLAWGLELPPGRIGSLETELVEEFLRAMVNNSGLTLHVRQLAGHNAHHLAEALFKALGRAIRQAVTLDPREQG-IPSTKGIL 195          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_RHOSK (Imidazoleglycerol-phosphate dehydratase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=hisB PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 9.391e-57
Identity = 103/194 (53.09%), Postives = 141/194 (72.68%), Query Frame = 1
Query:  175 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            R  E+ R T ET++SV +++DG+G  D  T + F DHM+DQLA H L D+ +R  GD+ IDDHHT ED G+A+G AL +ALGD++GI R+G F   +D+AL+  +LDLSGRP L ++L  PT+++G++DT+LV  FFQ+L    G+TLH+  + G NSHHI EA FKA AR+LR+A E DPRR   IPS+KG+L
Sbjct:    2 RKAEISRKTAETDISVTVDLDGTGRYDIRTGVGFFDHMMDQLARHALIDITLRCEGDLHIDDHHTVEDCGIALGQALTRALGDKRGIRRYGSFHLAMDDALVRAALDLSGRPFLVWNLPFPTEKIGSFDTELVREFFQALATHGGITLHVDLIHGVNSHHIAEAAFKAVARSLREAVEPDPRRADAIPSTKGML 195          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_RHOS4 (Imidazoleglycerol-phosphate dehydratase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=hisB PE=3 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 9.391e-57
Identity = 103/194 (53.09%), Postives = 141/194 (72.68%), Query Frame = 1
Query:  175 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            R  E+ R T ET++SV +++DG+G  D  T + F DHM+DQLA H L D+ +R  GD+ IDDHHT ED G+A+G AL +ALGD++GI R+G F   +D+AL+  +LDLSGRP L ++L  PT+++G++DT+LV  FFQ+L    G+TLH+  + G NSHHI EA FKA AR+LR+A E DPRR   IPS+KG+L
Sbjct:    2 RKAEISRKTAETDISVTVDLDGTGRYDIRTGVGFFDHMMDQLARHALIDITLRCEGDLHIDDHHTVEDCGIALGQALTRALGDKRGIRRYGSFHLAMDDALVRAALDLSGRPFLVWNLPFPTEKIGSFDTELVREFFQALATHGGITLHVDLIHGVNSHHIAEAAFKAVARSLREAVEPDPRRADAIPSTKGML 195          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_RHOFD (Imidazoleglycerol-phosphate dehydratase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=hisB PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.602e-56
Identity = 111/203 (54.68%), Postives = 139/203 (68.47%), Query Frame = 1
Query:  148 STSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            ST  A+   R  EV R T ET ++VK+N+DGSG +  ST I F DHMLDQ+A HGL D+ ++ATGD+ ID HHT EDVG+ +G A+ QA+GD+KGI R+G    PLDEAL  V +D SGRP L  D+   +  +GT+D QL   FFQ  VN + +TLHI  L G+N+HH  E  FKAFARALR A E+DPR  G IPS+KG L
Sbjct:    2 STPIALVPARTAEVTRNTAETRITVKVNLDGSGQSHLSTGIGFFDHMLDQIARHGLIDLDIQATGDLHIDGHHTVEDVGITLGQAVHQAVGDKKGIRRYGHAYVPLDEALSRVVIDFSGRPGLVMDVPFKSGMIGTFDAQLAHEFFQGFVNHAFVTLHIDNLKGENAHHQAETVFKAFARALRAALEFDPRALGQIPSTKGTL 204          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_RHOS1 (Imidazoleglycerol-phosphate dehydratase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=hisB PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.732e-56
Identity = 102/194 (52.58%), Postives = 140/194 (72.16%), Query Frame = 1
Query:  175 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            R  E+ R T ET++SV +++DG+G  D  T + F DHM+DQLA H L D+ +R  GD+ IDDHHT ED G+A+G AL +ALGD++GI R+G F   +D+AL+  +LDLSGRP L ++L  PT+++G++DT+LV  FFQ+     G+TLH+  + G NSHHI EA FKA AR+LR+A E DPRR   IPS+KG+L
Sbjct:    2 RKAEISRKTAETDISVTVDLDGTGRYDIRTGVGFFDHMMDQLARHALIDITLRCEGDLHIDDHHTVEDCGIALGQALTRALGDKRGIRRYGSFHLAMDDALVRAALDLSGRPFLVWNLPFPTEKIGSFDTELVREFFQAFATHGGITLHVDLIHGVNSHHIAEAAFKAVARSLREAVEPDPRRADAIPSTKGML 195          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_ROSDO (Imidazoleglycerol-phosphate dehydratase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=hisB PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 6.087e-56
Identity = 104/194 (53.61%), Postives = 138/194 (71.13%), Query Frame = 1
Query:  175 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            R   + R T ET++ V + +DG+G  D+ T + F DHMLDQLA H L D+ VRA GD+ +DDHHT ED G+A+G AL  ALGD++GI R+G    P+D+AL+  +LDLS RP+L +++ +PT ++GT+DT+LV  FF +L    G+TLHI  L G NSHHI EATFK+ ARALRQA E DPR+   IPS+KG L
Sbjct:    2 RSHSITRSTAETDIEVSVQLDGTGRYDNQTGVGFFDHMLDQLARHSLIDLSVRAKGDLHVDDHHTVEDTGIALGQALAGALGDKRGIVRYGSCLLPMDDALVRCALDLSARPYLIWNVDMPTAKIGTFDTELVREFFTALATHGGITLHIDLLHGINSHHIAEATFKSVARALRQAVETDPRKSDAIPSTKGAL 195          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_NEIMF (Imidazoleglycerol-phosphate dehydratase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=hisB PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.950e-56
Identity = 110/229 (48.03%), Postives = 145/229 (63.32%), Query Frame = 1
Query:   70 RRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            R+    T P  +    G ++     A T+SA     +  V R T ET ++V IN+DGSG +   T +PFL+HM+DQ+A HG+ D+ +   GD+ IDDHHT ED+G+ +G A+ QALGD+KGI R+G    PLDEAL  V +DLSGRP L Y+++     +G +D  L E FF  +VN S MTLHI  L+GKN+HH  E  FKAF RALR A E+DPR  G  PS+KG L
Sbjct:   78 RKHRERTVPETAAESTGTAETQ--IAETASAAGCRSV-TVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDIDISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLSGRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFKAFGRALRMAVEHDPRMAGQTPSTKGTL 303          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_NEIMB (Imidazoleglycerol-phosphate dehydratase OS=Neisseria meningitidis serogroup B GN=hisB PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.950e-56
Identity = 110/229 (48.03%), Postives = 145/229 (63.32%), Query Frame = 1
Query:   70 RRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            R+    T P  +    G ++     A T+SA     +  V R T ET ++V IN+DGSG +   T +PFL+HM+DQ+A HG+ D+ +   GD+ IDDHHT ED+G+ +G A+ QALGD+KGI R+G    PLDEAL  V +DLSGRP L Y+++     +G +D  L E FF  +VN S MTLHI  L+GKN+HH  E  FKAF RALR A E+DPR  G  PS+KG L
Sbjct:   78 RKHRERTVPETAAESTGTAETQ--IAETASAAGCRSV-TVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDIDISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLSGRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFKAFGRALRMAVEHDPRMAGQTPSTKGTL 303          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_NEIMA (Imidazoleglycerol-phosphate dehydratase OS=Neisseria meningitidis serogroup A GN=hisB PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.950e-56
Identity = 110/229 (48.03%), Postives = 145/229 (63.32%), Query Frame = 1
Query:   70 RRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            R+    T P  +    G ++     A T+SA     +  V R T ET ++V IN+DGSG +   T +PFL+HM+DQ+A HG+ D+ +   GD+ IDDHHT ED+G+ +G A+ QALGD+KGI R+G    PLDEAL  V +DLSGRP L Y+++     +G +D  L E FF  +VN S MTLHI  L+GKN+HH  E  FKAF RALR A E+DPR  G  PS+KG L
Sbjct:   78 RKHRERTVPETAAESTGTAETQ--IAETASAAGCRSV-TVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDIDISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLSGRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFKAFGRALRMAVEHDPRMAGQTPSTKGTL 303          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_NEIM0 (Imidazoleglycerol-phosphate dehydratase OS=Neisseria meningitidis serogroup C (strain 053442) GN=hisB PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.950e-56
Identity = 110/229 (48.03%), Postives = 145/229 (63.32%), Query Frame = 1
Query:   70 RRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            R+    T P  +    G ++     A T+SA     +  V R T ET ++V IN+DGSG +   T +PFL+HM+DQ+A HG+ D+ +   GD+ IDDHHT ED+G+ +G A+ QALGD+KGI R+G    PLDEAL  V +DLSGRP L Y+++     +G +D  L E FF  +VN S MTLHI  L+GKN+HH  E  FKAF RALR A E+DPR  G  PS+KG L
Sbjct:   78 RKHRERTVPETAAESTGTAETQ--IAETASAAGCRSV-TVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDIDISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLSGRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFKAFGRALRMAVEHDPRMAGQTPSTKGTL 303          
The following BLAST results are available for this feature:
BLAST of CK939683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS7_MOOTA7.191e-5753.68Imidazoleglycerol-phosphate dehydratase OS=Moorell... [more]
HIS7_RHOSK9.391e-5753.09Imidazoleglycerol-phosphate dehydratase OS=Rhodoba... [more]
HIS7_RHOS49.391e-5753.09Imidazoleglycerol-phosphate dehydratase OS=Rhodoba... [more]
HIS7_RHOFD1.602e-5654.68Imidazoleglycerol-phosphate dehydratase OS=Rhodofe... [more]
HIS7_RHOS12.732e-5652.58Imidazoleglycerol-phosphate dehydratase OS=Rhodoba... [more]
HIS7_ROSDO6.087e-5653.61Imidazoleglycerol-phosphate dehydratase OS=Roseoba... [more]
HIS7_NEIMF7.950e-5648.03Imidazoleglycerol-phosphate dehydratase OS=Neisser... [more]
HIS7_NEIMB7.950e-5648.03Imidazoleglycerol-phosphate dehydratase OS=Neisser... [more]
HIS7_NEIMA7.950e-5648.03Imidazoleglycerol-phosphate dehydratase OS=Neisser... [more]
HIS7_NEIM07.950e-5648.03Imidazoleglycerol-phosphate dehydratase OS=Neisser... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004747_A02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIIF_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939683 ID=CK939683; Name=CK939683; organism=Citrus sinensis; type=EST; length=927bp
GGGGTTAAACCAAAAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCAC
ACAATACTGCTCCTCAACGCGCCGCATGAACTCCCTCACAACACCACGCG
CCTCTCTAAACCCAGACGGCGACAGCAAACACAACAACGGGTCCGCCTCA
ACTTCCTCTGCCGTCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCAC
GAAAGAGACCAACGTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTG
CTGATTCATCCACTTGCATTCCCTTCCTAGATCACATGCTTGATCAACTG
GCTTCGCACGGGCTATTTGATGTGCACGTGAGGGCAACCGGAGACATTCG
CATTGATGATCATCATACCAATGAAGACGTTGGGCTTGCCATTGGCACGG
CATTGCTGCAGGCTCTTGGTGATAGGAAAGGAATTAATCGGTTTGGTGAT
TTTACAGCTCCTCTTGATGAAGCTTTGATTCATGTTTCATTGGATTTATC
TGGACGGCCACATTTAAATTATGATTTGCAAATTCCCACACAGAGAGTTG
GAACTTACGACACTCAATTGGTGGAGCACTTTTTCCAGTCTTTGGTGAAC
ACTTCTGGAATGACTCTTCATATTCGACAGCTTGCTGGAAAAAATTCTCA
TCACATTATTGAGGCAACCTTCAAAGCTTTTGCTAGGGCTCTCCGACAAG
CAACAGAGTATGATCCACGTCGCGGTGGAACTATACCAAGCTCAAAAGGG
GTTCTACTACGATCTTGATACTTCACGGGATTCATGGACTGGGGATGGGG
TTCTTCATGTAGCCTTAAGATTATTGTTAAGAGGGTTATAACTTCATCAC
CGGCTCCTACCATATGCATTAAAAGGTGTTCTTTTGATTTCTGGTGGTTC
ACTCTCATATCATTNNNGGNANNTGTG
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