CK939683

Overview
NameCK939683
Unique NameCK939683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_TERTT (Imidazoleglycerol-phosphate dehydratase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=hisB PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.362e-54
Identity = 102/194 (52.58%), Postives = 133/194 (68.56%), Query Frame = 1
Query:  175 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            R   V R T ET +SV +N+DG+G A  +T +PFL+HM+DQ+A HG+ D+ VR  GD  IDDHH+ ED+G+ IG A+ QA+GD++GI R+G    PLDEAL  V +D SGRP L   +    +R+G++DT+L   FFQ  VN +G+TLHI  L G N+HH IE  FKAF RALR A E DPR G  +PS+KG L
Sbjct:    4 RKAAVNRDTLETQISVALNLDGTGAAAFATGVPFLEHMMDQIARHGMIDLDVRCQGDTHIDDHHSVEDIGITIGQAMHQAVGDKRGIRRYGHAYVPLDEALSRVVIDFSGRPGLEMHIPFTQKRIGSFDTELFWEFFQGFVNHAGVTLHIDCLRGHNAHHQIETVFKAFGRALRMALEVDPRMGNAMPSTKGTL 197          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_PSYWF (Imidazoleglycerol-phosphate dehydratase OS=Psychrobacter sp. (strain PRwf-1) GN=hisB PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.362e-54
Identity = 104/194 (53.61%), Postives = 129/194 (66.49%), Query Frame = 1
Query:  175 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            RI  V+R T ET VSV +N+DG+G     T +PFLDHMLDQ+  HGLFD+ +   GD  IDDHH+ ED G+ +G A  +ALGD+KGI R+G F APLDE+L    +D+SGRP L+ D+      VG +D  L   FF   VN + MT+H+  L GKNSHH IE TFKAFARALR A EYD R   T+PS+K  L
Sbjct:   15 RIASVERNTAETQVSVTVNLDGTGQGKIDTGVPFLDHMLDQIKRHGLFDLDITCKGDTYIDDHHSIEDTGITLGQAFAKALGDKKGIRRYGHFYAPLDESLTRAVVDISGRPGLHMDIPFTRSHVGNFDVDLFSEFFFGFVNHAWMTVHLDNLKGKNSHHQIECTFKAFARALRMACEYDERALNTLPSTKEAL 208          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_BORPD (Imidazoleglycerol-phosphate dehydratase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=hisB PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.362e-54
Identity = 101/194 (52.06%), Postives = 129/194 (66.49%), Query Frame = 1
Query:  175 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            R  E+ R T ET + V +N+DG+G     T +PFLDHMLDQ+A HGL D+ ++A GD+ ID HHT EDVG+ +G A+ +A+GD+ G+ R+G    PLDEAL  V +D SGRP L Y +     R+G +D  L   FFQ LVN + +TLHI  L G N+HH  E  FKAF RALR A E DPR GG +PS+KGVL
Sbjct:    2 RTAEITRNTNETRIRVAVNLDGTGKQTLDTGVPFLDHMLDQIARHGLIDLDIKAEGDLHIDAHHTVEDVGITLGMAIAKAVGDKAGLRRYGHAYVPLDEALSRVVIDFSGRPGLEYHIPFTRARIGDFDVDLTREFFQGLVNHALVTLHIDNLRGVNAHHQCETVFKAFGRALRMALELDPRMGGAVPSTKGVL 195          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_THETN (Imidazoleglycerol-phosphate dehydratase OS=Thermoanaerobacter tengcongensis GN=hisB PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.697e-54
Identity = 104/194 (53.61%), Postives = 136/194 (70.10%), Query Frame = 1
Query:  175 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            R  EVKR T ET++ V++N+DG G  D  T I F DHML   A HGLFD+ V A GD+ +D HHT EDVG+ +GTA L+A GD+K I RF  F  P+DEAL+ VSLD+SGRP+L YDL +  +RVG ++T+ VE FF++     G+TLH+  L G N+HHIIEA+FKA  +AL +A + D R  G IPS+KG+L
Sbjct:    2 RKAEVKRKTAETDIYVELNIDGKGSYDIKTGIGFFDHMLSLFAKHGLFDLKVIAKGDLEVDTHHTVEDVGIVLGTAFLKASGDKKSIKRFSTFYVPMDEALVRVSLDISGRPYLYYDLPLKAERVGNFETETVEEFFRAFAYNFGITLHVELLHGVNTHHIIEASFKALGKALDEALKLDERIDG-IPSTKGIL 194          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_RHILW (Imidazoleglycerol-phosphate dehydratase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=hisB PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.697e-54
Identity = 99/197 (50.25%), Postives = 136/197 (69.04%), Query Frame = 1
Query:  169 SGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVLL 759
            + R G V R T ET++SV +N+DG+G +  ST + F DHMLDQL+ H L D+ + + GD+ IDDHHT ED G+AIG A+ +ALGDR+GI R+      +DE +   ++DLSGRP L +++     ++GT+DT+LV  FFQ+L   +G+TLHI    G N+HHI E  FKA ARALR ATE DPR+ G +PS+KG L+
Sbjct:    6 ASRTGSVSRKTNETSISVSVNLDGTGKSKISTGVGFFDHMLDQLSRHSLIDMEIESQGDLHIDDHHTVEDTGIAIGQAISKALGDRRGITRYASIDLAMDETMTKAAVDLSGRPFLVWNVAFSAPKIGTFDTELVREFFQALAQNAGITLHILNHYGANNHHIAETCFKAVARALRTATEIDPRQVGRVPSTKGTLV 202          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_GEOUR (Imidazoleglycerol-phosphate dehydratase OS=Geobacter uraniireducens (strain Rf4) GN=hisB PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.697e-54
Identity = 101/190 (53.16%), Postives = 135/190 (71.05%), Query Frame = 1
Query:  187 VKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            ++R+TKET + + +N+DGSG A   T +PFLDHML+  A HGLFD+ V A GDI ID HHT ED+G+ +G AL QALGD++GI R+G  T P+DE L  V++DLSGRP+L Y++++P  ++G +D +L   FFQ+L N     LHI  + G N HHI+EA FKA ARAL QAT+ DPR  G + S+KG L
Sbjct:    7 IERITKETQIKLSLNIDGSGEARVCTSVPFLDHMLNLFARHGLFDLEVEAKGDIDIDFHHTVEDIGIVLGEALKQALGDKQGIRRYGQATVPMDETLASVAVDLSGRPYLVYNVRLPKVKIGEFDVELAREFFQALTNNLAANLHINVMYGDNVHHILEACFKALARALDQATQQDPRIAG-VMSTKGKL 195          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_DECAR (Imidazoleglycerol-phosphate dehydratase OS=Dechloromonas aromatica (strain RCB) GN=hisB PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.697e-54
Identity = 103/194 (53.09%), Postives = 131/194 (67.53%), Query Frame = 1
Query:  175 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            R  E+ R T ET ++V++N+DG+G    +T +PFLDHMLDQ+A HGL D+ + A GD+ ID HHT ED+G+  G AL +A GD+KG+ R+G    PLDEAL  V +DLSGRP L   ++     +GT+D  LV  FF  LVN +GMTLHI  L GKN+HH  E  FKAF RALR A   DPR  GT+PS+KG L
Sbjct:    2 RQAEITRNTLETQITVRLNLDGTGQGKYATGVPFLDHMLDQIARHGLIDLDIEAKGDLHIDAHHTVEDIGITFGQALAKAWGDKKGLTRYGHSYVPLDEALSRVVIDLSGRPGLELHVEFTRAVIGTFDVDLVGEFFHGLVNHAGMTLHIDNLRGKNAHHQAETIFKAFGRALRMAVTPDPRMAGTMPSTKGSL 195          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_CELJU (Imidazoleglycerol-phosphate dehydratase OS=Cellvibrio japonicus (strain Ueda107) GN=hisB PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.697e-54
Identity = 102/196 (52.04%), Postives = 134/196 (68.37%), Query Frame = 1
Query:  169 SGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            S RI +V R T ET +SV +N+DG+G    +T +PFL+HM+DQ+A HG+ D+ V   GD  IDDHH+ ED+G+ IG A+ +A+GD+KGI R+G    PLDEAL  V +D SGRP L  D+    +R+G +DT+L   FFQ  VN +G+TLH+  L G N+HH IE  FKAF RALR A E DPR  G +PS+KG L
Sbjct:    2 SDRIAQVTRNTLETKISVSLNLDGAGKGVFNTGVPFLEHMMDQIARHGMIDLDVTCDGDTHIDDHHSVEDIGITIGQAIAKAVGDKKGIRRYGHAYVPLDEALSRVVIDFSGRPGLVMDIPFTQKRIGQFDTELFWEFFQGFVNHAGVTLHVDNLRGHNAHHQIETVFKAFGRALRMALEKDPRMEGIMPSTKGSL 197          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_BURCJ (Imidazoleglycerol-phosphate dehydratase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=hisB PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.697e-54
Identity = 104/194 (53.61%), Postives = 131/194 (67.53%), Query Frame = 1
Query:  175 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            R+ EV R T ET + VK+++DG+G    +T +PFLDHMLDQ+A HGL D+ V A GD  IDDHHT EDVG+ +G A+ +A+GDRKGI R+G    PLDEAL  V +D SGRP L + +     R+GT+D  L   FF+  VN +G+TLHI  L G N+HH +E  FKAF RALR A E D R  G IPS+KG L
Sbjct:    2 RVAEVVRNTSETQIRVKLDLDGTGQQKLATGVPFLDHMLDQIARHGLVDLEVEAHGDTHIDDHHTVEDVGITLGQAVAKAIGDRKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAHHQLETVFKAFGRALRAAVELDERAAGQIPSTKGSL 195          
BLAST of CK939683 vs. ExPASy Swiss-Prot
Match: HIS7_BURCC (Imidazoleglycerol-phosphate dehydratase OS=Burkholderia cenocepacia (strain MC0-3) GN=hisB PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.697e-54
Identity = 104/194 (53.61%), Postives = 131/194 (67.53%), Query Frame = 1
Query:  175 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIRIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATEYDPRRGGTIPSSKGVL 756
            R+ EV R T ET + VK+++DG+G    +T +PFLDHMLDQ+A HGL D+ V A GD  IDDHHT EDVG+ +G A+ +A+GDRKGI R+G    PLDEAL  V +D SGRP L + +     R+GT+D  L   FF+  VN +G+TLHI  L G N+HH +E  FKAF RALR A E D R  G IPS+KG L
Sbjct:    2 RVAEVVRNTSETQIRVKLDLDGTGQQKLATGVPFLDHMLDQIARHGLVDLEVEAHGDTHIDDHHTVEDVGITLGQAVAKAIGDRKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAHHQLETVFKAFGRALRAAVELDERAAGQIPSTKGSL 195          
The following BLAST results are available for this feature:
BLAST of CK939683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS7_TERTT4.362e-5452.58Imidazoleglycerol-phosphate dehydratase OS=Teredin... [more]
HIS7_PSYWF4.362e-5453.61Imidazoleglycerol-phosphate dehydratase OS=Psychro... [more]
HIS7_BORPD4.362e-5452.06Imidazoleglycerol-phosphate dehydratase OS=Bordete... [more]
HIS7_THETN5.697e-5453.61Imidazoleglycerol-phosphate dehydratase OS=Thermoa... [more]
HIS7_RHILW5.697e-5450.25Imidazoleglycerol-phosphate dehydratase OS=Rhizobi... [more]
HIS7_GEOUR5.697e-5453.16Imidazoleglycerol-phosphate dehydratase OS=Geobact... [more]
HIS7_DECAR5.697e-5453.09Imidazoleglycerol-phosphate dehydratase OS=Dechlor... [more]
HIS7_CELJU5.697e-5452.04Imidazoleglycerol-phosphate dehydratase OS=Cellvib... [more]
HIS7_BURCJ5.697e-5453.61Imidazoleglycerol-phosphate dehydratase OS=Burkhol... [more]
HIS7_BURCC5.697e-5453.61Imidazoleglycerol-phosphate dehydratase OS=Burkhol... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004747_A02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIIF_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939683 ID=CK939683; Name=CK939683; organism=Citrus sinensis; type=EST; length=927bp
GGGGTTAAACCAAAAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCAC
ACAATACTGCTCCTCAACGCGCCGCATGAACTCCCTCACAACACCACGCG
CCTCTCTAAACCCAGACGGCGACAGCAAACACAACAACGGGTCCGCCTCA
ACTTCCTCTGCCGTCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCAC
GAAAGAGACCAACGTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTG
CTGATTCATCCACTTGCATTCCCTTCCTAGATCACATGCTTGATCAACTG
GCTTCGCACGGGCTATTTGATGTGCACGTGAGGGCAACCGGAGACATTCG
CATTGATGATCATCATACCAATGAAGACGTTGGGCTTGCCATTGGCACGG
CATTGCTGCAGGCTCTTGGTGATAGGAAAGGAATTAATCGGTTTGGTGAT
TTTACAGCTCCTCTTGATGAAGCTTTGATTCATGTTTCATTGGATTTATC
TGGACGGCCACATTTAAATTATGATTTGCAAATTCCCACACAGAGAGTTG
GAACTTACGACACTCAATTGGTGGAGCACTTTTTCCAGTCTTTGGTGAAC
ACTTCTGGAATGACTCTTCATATTCGACAGCTTGCTGGAAAAAATTCTCA
TCACATTATTGAGGCAACCTTCAAAGCTTTTGCTAGGGCTCTCCGACAAG
CAACAGAGTATGATCCACGTCGCGGTGGAACTATACCAAGCTCAAAAGGG
GTTCTACTACGATCTTGATACTTCACGGGATTCATGGACTGGGGATGGGG
TTCTTCATGTAGCCTTAAGATTATTGTTAAGAGGGTTATAACTTCATCAC
CGGCTCCTACCATATGCATTAAAAGGTGTTCTTTTGATTTCTGGTGGTTC
ACTCTCATATCATTNNNGGNANNTGTG
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