CK939675

Overview
NameCK939675
Unique NameCK939675
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: TDH_SHIB3 (L-threonine 3-dehydrogenase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=tdh PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 1
Query:  223 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            +P LG  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMG 208          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: TDH_PHOLL (L-threonine 3-dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=tdh PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29
Identity = 71/190 (37.37%), Postives = 107/190 (56.32%), Query Frame = 1
Query:  226 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            P LG  DV+++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            G  A  +V PA   FK+PDN+S E  A+ +P    +H     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G
Sbjct:   21 PELGHNDVMIKIRKTAICGTDVHIYNWDDWSQKTIPVPMVVGHEYVGEVVAIGQEVKGFKIGDRVSGEGHITCGYCRNCRGGRTHLCRNTIGVGVNRA-GCFAQYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVITDVNEYRLELARKMG 208          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: TDH_ENTS8 (L-threonine 3-dehydrogenase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=tdh PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29
Identity = 70/190 (36.84%), Postives = 109/190 (57.37%), Query Frame = 1
Query:  226 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            P +G  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            G  A  +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRLS+A+++G
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNR-PGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLSLARKMG 208          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: TDH_ENT38 (L-threonine 3-dehydrogenase OS=Enterobacter sp. (strain 638) GN=tdh PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29
Identity = 70/190 (36.84%), Postives = 109/190 (57.37%), Query Frame = 1
Query:  226 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            P +G  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            G  A  +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRLS+A+++G
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNR-PGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLSLARKMG 208          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: TDH_ECOUT (L-threonine 3-dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 1
Query:  223 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            +P LG  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMG 208          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: TDH_ECOSM (L-threonine 3-dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 1
Query:  223 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            +P LG  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMG 208          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: TDH_ECOSE (L-threonine 3-dehydrogenase OS=Escherichia coli (strain SE11) GN=tdh PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 1
Query:  223 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            +P LG  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMG 208          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: TDH_ECOLU (L-threonine 3-dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 1
Query:  223 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            +P LG  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMG 208          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: TDH_ECOLC (L-threonine 3-dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=tdh PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 1
Query:  223 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            +P LG  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMG 208          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: TDH_ECOL6 (L-threonine 3-dehydrogenase OS=Escherichia coli O6 GN=tdh PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 1
Query:  223 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            +P LG  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMG 208          
The following BLAST results are available for this feature:
BLAST of CK939675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 301
Match NameE-valueIdentityDescription
TDH_SHIB32.243e-2936.98L-threonine 3-dehydrogenase OS=Shigella boydii ser... [more]
TDH_PHOLL2.243e-2937.37L-threonine 3-dehydrogenase OS=Photorhabdus lumine... [more]
TDH_ENTS82.243e-2936.84L-threonine 3-dehydrogenase OS=Enterobacter sakaza... [more]
TDH_ENT382.243e-2936.84L-threonine 3-dehydrogenase OS=Enterobacter sp. (s... [more]
TDH_ECOUT2.243e-2936.98L-threonine 3-dehydrogenase OS=Escherichia coli (s... [more]
TDH_ECOSM2.243e-2936.98L-threonine 3-dehydrogenase OS=Escherichia coli (s... [more]
TDH_ECOSE2.243e-2936.98L-threonine 3-dehydrogenase OS=Escherichia coli (s... [more]
TDH_ECOLU2.243e-2936.98L-threonine 3-dehydrogenase OS=Escherichia coli O1... [more]
TDH_ECOLC2.243e-2936.98L-threonine 3-dehydrogenase OS=Escherichia coli (s... [more]
TDH_ECOL62.243e-2936.98L-threonine 3-dehydrogenase OS=Escherichia coli O6... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004747_B02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIIF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939675 ID=CK939675; Name=CK939675; organism=Citrus sinensis; type=EST; length=796bp
GCGGCCGAATCAAATCATATCCCATATCCAGAATCAGAATAAATGGTAGC
TTAAAATGTTGTGTACAGAGTGAAGTCTCTTCTGTGCACTTGTGTTTTTG
AAGGGTAAAAAGCAAATATGGGCAAAGGAGGGATGTCACAAGGAGAAAAG
AAGGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTATGGGTGTCAACAC
CCTCAAGATTCAACCTTTTGAGCTTCCTTCTCTGGGACCATATGATGTTT
TAGTCAGGATGAAAGCCGTTGGTATTTGTGGAAGTGATGTGCATTATCTC
AAGACCTTGAGGTGTGCCGATTTTGTTGTGAAAGAGCCTATGGTGATTGG
GCACGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGGTGAAGACTT
TGGTGCCCGGTGACCGTGTGGCCCTGGAACCCGGGATCAGCTGCTGGCGA
TGCGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAGAGATGAAATT
TTTTGCAACTCCGCCCGTTCATGGTTCCCTGGCTAATCAGGTGGTGCATC
CTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGGAAGGG
GCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGTGCCAA
TATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCATAGGAC
TTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATTGTCATT
GTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGGTG
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