CX675708
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH60_THEM4 (60 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groL PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.314e-17 Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = -3 Query: 344 DQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 640 D+KIG +I+ AL P++ I K+LEQD+ G+DA KGEY DM + GIIDP KV R+AL +AAS++ ++ TTE +VVE P+ + P Sbjct: 434 DEKIGAKIVYEALSAPINQIAKNAGYDGAIIIHKVLEQDDPAYGFDALKGEYCDMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEPKNNNP 532
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH60_PETMO (60 kDa chaperonin OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=groL PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.314e-17 Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = -3 Query: 353 DQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEK 640 D+KIG Q++ +L PV I K++E+D++ GYD K YV+M +SGIIDP KV R+AL +AAS++S++ TTE +V E PKEEK Sbjct: 434 DEKIGAQLVAKSLDAPVKQIIRNAGLEPAIIIEKIIEKDDSKYGYDVLKERYVNMFESGIIDPTKVTRSALQNAASIASMLLTTEVLVAEEPKEEK 529
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH60_MAGSA (60 kDa chaperonin OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=groL PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.314e-17 Identity = 44/95 (46.32%), Postives = 62/95 (65.26%), Query Frame = -3 Query: 356 DQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEE 640 DQ++G+ I++ AL+ PV I GK+ E + G+DA G Y DM+K+GIIDP KV+RTAL DAASV+ L+ TTEA++ E PK++ Sbjct: 435 DQEVGISIVRRALQAPVRQIAENAGHDGAVVAGKIGESKDLSFGFDAQTGIYTDMIKAGIIDPTKVVRTALQDAASVAGLLITTEAMIAERPKKD 529
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH60_AGRT5 (60 kDa chaperonin OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=groL PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.314e-17 Identity = 44/99 (44.44%), Postives = 67/99 (67.68%), Query Frame = -3 Query: 344 DQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 640 DQ+ G+ I++ AL++ V I GK+L+++ + GY+A GEY D++ GI+DP+KV+RTAL +AASV+SL+ TTEA++ ELPK+E P Sbjct: 434 DQEAGINIVRKALQSLVRQIAENAGDEASIVVGKILDKNEDNYGYNAQTGEYGDLIALGIVDPVKVVRTALQNAASVASLLITTEAMIAELPKKESAMP 532
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH60_RICCK (60 kDa chaperonin OS=Rickettsia canadensis (strain McKiel) GN=groL PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.022e-17 Identity = 45/99 (45.45%), Postives = 66/99 (66.67%), Query Frame = -3 Query: 344 DQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 640 DQ+ G++I+ ALK P+ I GKLLE + + G++A +YVDM+++GIIDP KV+RTAL DAASV+SL+ TTE ++V+ P +E+ P Sbjct: 435 DQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNFGFNAQDMQYVDMIQAGIIDPAKVVRTALQDAASVASLIITTETLIVDEPSKEEPMP 533
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH60_FERNB (60 kDa chaperonin OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=groL PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.022e-17 Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = -3 Query: 347 DQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEA 640 D+K+G QI+ NAL+ P+ I +L +D+ G+DA KGEY +M + GIIDP KV R+AL +AAS++ ++ TTE +VVE P+E+K A Sbjct: 434 DEKLGAQIVYNALEAPIRQIALNAGYDGAIIIHNVLSKDDVAYGFDALKGEYCNMYERGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEEKKPA 531
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH60_EUGGR (Chaperonin CPN60, mitochondrial OS=Euglena gracilis GN=HSP60 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.022e-17 Identity = 44/92 (47.83%), Postives = 61/92 (66.30%), Query Frame = -3 Query: 365 DQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELP 640 DQK GV+I+ +A+K P TI +LL + GYDA +G+YV+M ++GIIDP KV++TALVDAASV+ LM TTEA + ++P Sbjct: 452 DQKTGVRIVMSAIKLPAITIVKNAGGEGAVVIHQLLAEKKMQQGYDAQQGKYVNMFEAGIIDPAKVVKTALVDAASVAGLMITTEAAITDIP 543
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH604_RHILO (60 kDa chaperonin 4 OS=Rhizobium loti GN=groL4 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.022e-17 Identity = 44/95 (46.32%), Postives = 59/95 (62.11%), Query Frame = -3 Query: 356 DQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEE 640 DQ G+ I++ AL+ P I GK+LE GY+A GEY DM+ GI+DP+KV+RTAL DAASV+ L+ TTEA++ E PK+E Sbjct: 434 DQAAGINIVRRALQAPARQIASNAGAEASIVAGKILENKGATFGYNAQTGEYGDMIAMGIVDPVKVVRTALQDAASVAGLLVTTEAMIAEAPKKE 528
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH602_ANADF (60 kDa chaperonin 2 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=groL2 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.022e-17 Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = -3 Query: 344 QKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 637 +K G+ I++ AL+ P+ I K+ E +T+ G++AA G+Y D+VKSG+IDP KV R+AL +A+SV+SLM TT A+V E PKEE AP Sbjct: 435 EKFGLDIVRRALEEPLRQIAGNGGYEASIVVNKVKESKDTNFGFNAATGDYEDLVKSGVIDPTKVSRSALQNASSVASLMLTTMALVAEKPKEESAAP 532
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH601_BRASB (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.022e-17 Identity = 47/98 (47.96%), Postives = 61/98 (62.24%), Query Frame = -3 Query: 347 DQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEA 640 D + G+ I+ AL+ PV I GK+LE+ + G+DA +YVDMV GIIDP KV+RTAL DA+SV+ L+ TTEA+V ELPKE A Sbjct: 435 DVQAGINIVLKALEAPVRQIAENAGVEGSLVVGKILEEKSETFGFDAQSEDYVDMVAKGIIDPAKVVRTALQDASSVAGLLVTTEAMVAELPKEAAPA 532 The following BLAST results are available for this feature:
BLAST of CX675708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675708 ID=CX675708; Name=CX675708; organism=Citrus sinensis; type=EST; length=645bpback to top |