CK939607

Overview
NameCK939607
Unique NameCK939607
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.097e-28
Identity = 68/154 (44.16%), Postives = 91/154 (59.09%), Query Frame = 3
Query:  219 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNE-GCN 677
            F  + ++H K Y+++ E ++RFEIF +NL+ I  HN +  +YK+G+N F DLT +E+R   LGA      T+    + N  L  V   LP++ DWRK G V+ VK QG CGSCW FST  A+E       G  ISLSEQ+LVD     N  GCN
Sbjct:   57 FARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGASQNCSATT----KGNLKLTNV--VLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCN 204          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27
Identity = 68/154 (44.16%), Postives = 91/154 (59.09%), Query Frame = 3
Query:  219 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVD-XXTXXNEGCN 677
            F  W+  + KAY    E   R+E FK+N+ ++   NS+     +GLN+ ADL+NEEYR  +LG R   K      +     L R     P +VDWR+K AV  VKDQG CGSC++FST  +VEG+  I TG L+SLSEQ ++D   +  NEGCN
Sbjct:   34 FIDWMRSNNKAYTHK-EFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCN 186          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.522e-27
Identity = 65/153 (42.48%), Postives = 91/153 (59.48%), Query Frame = 3
Query:  219 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGCN 677
            F  W++ H K+Y +  E   R+ IFK N+ ++ + NS+     +GLN FAD+TNEEYR+ +LG +F A  +SL   +  +       A   S DWR +GAV  VK+QG CG CW+FST  + EG +    G L+SLSEQ L+D  T  N GC+
Sbjct:   30 FTDWMITHQKSYTS-EEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDA--SSLIGTQEEKVFTTSSAA---SKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCST-ENSGCD 175          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.600e-27
Identity = 65/143 (45.45%), Postives = 84/143 (58.74%), Query Frame = 3
Query:  219 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVD 647
            F  +  K GK Y +  E + RF +FK NLR    H   + +   G+ +F+DLT  E+R  HLG R G K      K +N+      E LP+  DWR  GAV  VK+QGSCGSCW+FS   A+EG N + TG L+SLSEQ+LVD
Sbjct:   51 FSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGFKLP----KDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVD 189          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.600e-27
Identity = 66/163 (40.49%), Postives = 93/163 (57.06%), Query Frame = 3
Query:  195 TDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKV-GLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVD-XXTXXNEGCN 677
            ++ +    F  W +K  + Y++  E   R+ IFK N+ ++D  NS+  +  V GLN FAD+TNEEYR  +LG R  A   +    R    +  + +  P S+DWR K AV  +KDQG CGSCW+FST  + EG + + T  L+SLSEQ LVD      N GC+
Sbjct:   28 SESQYRTAFTEWTLKFNRQYSS-SEFSNRYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHSYNGYDGREVLNVEDL-QTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCSGPEENFGCD 188          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.600e-27
Identity = 71/182 (39.01%), Postives = 102/182 (56.04%), Query Frame = 3
Query:  105 LLFLF-TVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVD 647
            L+F+F +VS   D  ++      E++     ++D     F  +  K GK Y ++ E   RF +FK NL     H   + + + G+ +F+DLT  E+R  HLG + G K    K       LP   + LP+  DWR +GAV  VK+QGSCGSCW+FST  A+EG + + TG L+SLSEQ+LVD
Sbjct:   13 LIFVFVSVSVCGDEDVLIRQVVDETEPKVLSSEDH----FTLFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKGGFKLP--KDANQAPILPT--QNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVD 186          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.008e-27
Identity = 54/81 (66.67%), Postives = 67/81 (82.72%), Query Frame = 3
Query:  435 LKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGCN 677
            L   +S+RYLP+VG++LP+S+DWR+KG +  VKDQGSCGSCWAFS +AA+E IN IVTG+LISLSEQELVD     NEGC+
Sbjct:    2 LSKNKSDRYLPKVGDSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCD 82          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 7.847e-27
Identity = 66/156 (42.31%), Postives = 91/156 (58.33%), Query Frame = 3
Query:  228 WLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXT--XXNEGCN 677
            W   +GK Y    E+  R  I+++NL+F+  HN E+     +Y +G+N   D+T+EE  S+       + R   + +R+  Y       LPDSVDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVD  T    N+GCN
Sbjct:   31 WKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL-----MSSLRVPSQWQRNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCN 181          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.338e-26
Identity = 66/156 (42.31%), Postives = 91/156 (58.33%), Query Frame = 3
Query:  228 WLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXT--XXNEGCN 677
            W   + K Y    E+  R  I+++NL+F+  HN E+     +Y +G+N   D+T EE  S+      G+ R   + +R+  Y     + LPDSVDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVD  T    N+GCN
Sbjct:   31 WKKTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEVISL-----MGSLRVPSQWQRNVTYRSNSNQKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCN 181          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.338e-26
Identity = 69/154 (44.81%), Postives = 91/154 (59.09%), Query Frame = 3
Query:  219 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVD-XXTXXNEGCN 677
            F  +  ++GK Y  + E + RF IFKENL  I   N +  +YK+G+N+FADLT +E++   LGA   A+  S   K S++       ALP++ DWR+ G V+ VKDQG CGSCW FST  A+E       G  ISLSEQ+LVD      N GCN
Sbjct:   59 FARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGA---AQNCSATLKGSHKVTEA---ALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCN 206          
The following BLAST results are available for this feature:
BLAST of CK939607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CYSP3_SOLLC7.097e-2844.16Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CYSP3_DICDI1.211e-2744.16Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CYSP5_DICDI3.522e-2742.48Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
RD19A_ARATH4.600e-2745.45Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CYSP2_DICDI4.600e-2740.49Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
A494_ARATH4.600e-2739.01Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSPL_SOLLC6.008e-2766.67Low-temperature-induced cysteine proteinase (Fragm... [more]
CATS_HUMAN7.847e-2742.31Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CATS_CANFA1.338e-2642.31Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
ALEU_ARATH1.338e-2644.81Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004748_C03 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IVF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939607 ID=CK939607; Name=CK939607; organism=Citrus sinensis; type=EST; length=679bp
GGGGACACTCTGCCTCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAA
AAGTTCTTTTCTCAAAAGATGGGTTTGTTTAAATCACCAACCATGGCCAT
GTTTTTACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTG
TATCTTATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGAC
GATGAGGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGC
TTATAACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAA
ATCTTAGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTT
GGGTTGAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCA
TCTGGGTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGA
GCAACCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGAT
TGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGG
GAGTTGCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGA
TTGTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTNN
NNTACATNNNATAATGAAGGATGTAATGG
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