EG358193

Overview
NameEG358193
Unique NameEG358193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length464
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.794e-20
Identity = 44/56 (78.57%), Postives = 48/56 (85.71%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            YR VREELG   LTGEKV SPGE+ DKVFTAMC G+IID +LECL+EWNGAPLPIC
Sbjct:  657 YRFVREELGAELLTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEWNGAPLPIC 712          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL1_SOLTU (Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum GN=PAL-1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.794e-20
Identity = 43/56 (76.79%), Postives = 49/56 (87.50%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            YRLVR+ELGT  LTGEKV SPGE+ +KVFTAMC G+I DP+LECL+ WNGAPLPIC
Sbjct:  665 YRLVRQELGTELLTGEKVRSPGEEIEKVFTAMCNGQINDPLLECLKSWNGAPLPIC 720          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL2_PEA (Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.997e-20
Identity = 43/55 (78.18%), Postives = 50/55 (90.91%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPI 411
            Y+ VREELGT+ LTGEKV SPGE+ DK+FTA+CQGKIIDP+LECL +WNGAPLPI
Sbjct:  669 YKFVREELGTSLLTGEKVISPGEECDKLFTAICQGKIIDPLLECLGDWNGAPLPI 723          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL1_PRUAV (Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=PAL1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.997e-20
Identity = 42/56 (75.00%), Postives = 49/56 (87.50%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            Y+ VREELG  +LTGEKV SPGE+ DKVFTA+C+GKIIDP+L+CL  WNGAPLPIC
Sbjct:  662 YKFVREELGAEYLTGEKVRSPGEECDKVFTAICEGKIIDPILDCLEGWNGAPLPIC 717          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL1_PETCR (Phenylalanine ammonia-lyase 1 OS=Petroselinum crispum GN=PAL1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.997e-20
Identity = 42/56 (75.00%), Postives = 50/56 (89.29%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            Y+ VR+ELGT +LTGEKVTSPGE+F+KVF AM +G+IIDP+LECL  WNGAPLPIC
Sbjct:  661 YKFVRKELGTEYLTGEKVTSPGEEFEKVFIAMSKGEIIDPLLECLESWNGAPLPIC 716          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL2_PETCR (Phenylalanine ammonia-lyase 2 OS=Petroselinum crispum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.817e-20
Identity = 42/56 (75.00%), Postives = 49/56 (87.50%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            Y+ VR+ELG  +LTGEKVTSPGE+FDKVF AM +G+IIDP+LECL  WNGAPLPIC
Sbjct:  661 YKFVRKELGIEYLTGEKVTSPGEEFDKVFIAMSKGEIIDPLLECLESWNGAPLPIC 716          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.904e-20
Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            Y+ VRE LGT+ LTGEK+ SPGE+ DKVF A+C G+ IDPML+CL+EWNGAPLPIC
Sbjct:  663 YKFVRENLGTSLLTGEKIRSPGEECDKVFAALCDGRFIDPMLDCLKEWNGAPLPIC 718          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL1_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=PAL PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.904e-20
Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            Y+ VRE LGT  LTGEKV SPGE+ DKVFTAMC+G IIDP+LECL+ W+GAPLPIC
Sbjct:  652 YKFVREGLGTELLTGEKVRSPGEECDKVFTAMCEGSIIDPLLECLKSWDGAPLPIC 707          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.163e-19
Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            YR VR ELG   LTGEKV SPGE+ DKVFTAMC G+IID +LECL+EWNGAPLPIC
Sbjct:  657 YRFVRGELGAELLTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEWNGAPLPIC 712          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL1_PEA (Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=PAL1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.163e-19
Identity = 42/55 (76.36%), Postives = 49/55 (89.09%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPI 411
            YR VR+ELGT  LTGEKV SPGE+ DK+FTA+CQGKIIDP+L+CL +WNGAPLPI
Sbjct:  668 YRFVRQELGTGLLTGEKVISPGEECDKLFTAICQGKIIDPLLQCLGDWNGAPLPI 722          
The following BLAST results are available for this feature:
BLAST of EG358193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
PAL3_TOBAC1.794e-2078.57Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PAL1_SOLTU1.794e-2076.79Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... [more]
PAL2_PEA3.997e-2078.18Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=... [more]
PAL1_PRUAV3.997e-2075.00Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=P... [more]
PAL1_PETCR3.997e-2075.00Phenylalanine ammonia-lyase 1 OS=Petroselinum cris... [more]
PAL2_PETCR6.817e-2075.00Phenylalanine ammonia-lyase 2 OS=Petroselinum cris... [more]
PAL2_CICAR8.904e-2071.43Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]
PAL1_IPOBA8.904e-2075.00Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=... [more]
PAL2_TOBAC1.163e-1976.79Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL1_PEA1.163e-1976.36Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=... [more]

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Properties
Property NameValue
Genbank description4g10 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl004g10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358193 ID=EG358193; Name=EG358193; organism=Citrus sinensis; type=EST; length=464bp
ACCCTCTGCTGTAAAGGCCCCACCTACGGAGCCTGCATTTCATCTGGGAA
TTTCTTCAAGTGTTCCTAATAGTTTGCCCTCTCTGGTGAGAATGGAATCA
TTTGGCACCCAATCTGCCCTTGCTGAGCCTGGTCACTTACAGGGTCAGTT
AAAATTCGATATCCGAAGCACACCTAGTTTTCATCCTCATTCACTTCCAG
AGTGCCATGATGGTTTAAATAAGGGTGTTCGCTGCAATTCTTCGGGTACA
GGTTAGTGAGGGAGGAGCTCGGGACTAATTTTCTGACTGGGGAAAAAGTT
ACATCGCCCGGCGAGAAATTTGACAAAGTGTTTACAGCAATGTGCCAGGG
CAAGATCATTGATCCAATGCTGGAATGTCTCAGGGAATGGAATGGCGCCC
CTCTTCCAATATGCTAGTTGTTTTATTCTTAAGAATTCATTGAATTGCCG
ATGTGACTAAATGG
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