EG358193

Overview
NameEG358193
Unique NameEG358193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length464
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PALY_DIGLA (Phenylalanine ammonia-lyase OS=Digitalis lanata PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.519e-19
Identity = 41/56 (73.21%), Postives = 49/56 (87.50%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            Y+ +REELGTNFLTGEKV SPGE+ D+VFTAM +G I+DP+L+CL  WNGAPLPIC
Sbjct:  658 YKFIREELGTNFLTGEKVMSPGEECDRVFTAMSKGLIVDPLLKCLEGWNGAPLPIC 713          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL1_DAUCA (Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=PAL1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.519e-19
Identity = 42/55 (76.36%), Postives = 49/55 (89.09%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPI 411
            Y+ +REELGT +LTGEKVTSPGE+FDKVFTAM +G+IIDP+L CL  WNGAPLPI
Sbjct:  653 YKFIREELGTVYLTGEKVTSPGEEFDKVFTAMSKGEIIDPLLACLESWNGAPLPI 707          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PALY_BROFI (Phenylalanine ammonia-lyase OS=Bromheadia finlaysoniana GN=PAL PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.591e-19
Identity = 41/56 (73.21%), Postives = 50/56 (89.29%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            Y+ V+E +G+ FLTGEKV SPGE+FDKVF A+C+GK IDPML+CL+EWNGAPLPIC
Sbjct:  649 YKFVKE-VGSGFLTGEKVVSPGEEFDKVFNAICEGKAIDPMLDCLKEWNGAPLPIC 703          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL2_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.591e-19
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            Y+ VREELGT  LTGEKV SPGE  DKVFTA+C G IIDP+LECL+ W+GAPLPIC
Sbjct:  653 YKFVREELGTEMLTGEKVKSPGEVCDKVFTAVCDGGIIDPLLECLKSWDGAPLPIC 708          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PALY_MALDO (Phenylalanine ammonia-lyase (Fragment) OS=Malus domestica GN=PAL PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.419e-19
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            Y+ VREELG  +LTGEKV SPGE+ DKVF A+CQGKIIDP+L CL  WNGAPLPIC
Sbjct:  180 YKFVREELGGEYLTGEKVRSPGEECDKVFQAICQGKIIDPILGCLEGWNGAPLPIC 235          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL1_RUBID (Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=PAL1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.537e-19
Identity = 40/55 (72.73%), Postives = 48/55 (87.27%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPI 411
            YR VREELGT+ LTGEK+ SPGE+  KVF A+C GK++DP+LECL+EWNGAPLPI
Sbjct:  655 YRFVREELGTSLLTGEKIKSPGEECYKVFNAICAGKLVDPLLECLKEWNGAPLPI 709          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL4_POPKI (Phenylalanine ammonia-lyase G4 (Fragment) OS=Populus kitakamiensis GN=PALG4 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 9.844e-19
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            Y+ VREELGT  LTGEKV SPGE+FDKVFTA+C GK+IDP    L+EWNGAPLP+C
Sbjct:  516 YKFVREELGTVLLTGEKVGSPGEEFDKVFTAICAGKLIDPCWSVLKEWNGAPLPLC 571          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL2_LITER (Phenylalanine ammonia-lyase 2 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.193e-18
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            Y+ VR ELGT  LTGEKV SPGE+ D+VF A+C+GK++DP+L CL  WNGAPLPIC
Sbjct:  650 YKFVRGELGTELLTGEKVRSPGEELDQVFNALCEGKLVDPLLACLEAWNGAPLPIC 705          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PALY_WHEAT (Phenylalanine ammonia-lyase OS=Triticum aestivum GN=PAL PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.886e-18
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            YR VR+ELGT +LTGEK  SPGE+ DKVF AM QGK ID +LECL+EWNG PLP+C
Sbjct:  645 YRFVRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPLC 700          
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL4_ARATH (Phenylalanine ammonia-lyase 4 OS=Arabidopsis thaliana GN=PAL4 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 6.381e-18
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 1
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            YR VR+EL T  LTGE V SPGE+FDKVF A+  GK+IDP+LECL+EWNGAP+ IC
Sbjct:  652 YRFVRDELNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSIC 707          
The following BLAST results are available for this feature:
BLAST of EG358193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
PALY_DIGLA1.519e-1973.21Phenylalanine ammonia-lyase OS=Digitalis lanata PE... [more]
PAL1_DAUCA1.519e-1976.36Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=... [more]
PALY_BROFI2.591e-1973.21Phenylalanine ammonia-lyase OS=Bromheadia finlayso... [more]
PAL2_IPOBA2.591e-1975.00Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=... [more]
PALY_MALDO4.419e-1975.00Phenylalanine ammonia-lyase (Fragment) OS=Malus do... [more]
PAL1_RUBID7.537e-1972.73Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=P... [more]
PAL4_POPKI9.844e-1973.21Phenylalanine ammonia-lyase G4 (Fragment) OS=Popul... [more]
PAL2_LITER2.193e-1867.86Phenylalanine ammonia-lyase 2 OS=Lithospermum eryt... [more]
PALY_WHEAT4.886e-1871.43Phenylalanine ammonia-lyase OS=Triticum aestivum G... [more]
PAL4_ARATH6.381e-1869.64Phenylalanine ammonia-lyase 4 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank description4g10 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl004g10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358193 ID=EG358193; Name=EG358193; organism=Citrus sinensis; type=EST; length=464bp
ACCCTCTGCTGTAAAGGCCCCACCTACGGAGCCTGCATTTCATCTGGGAA
TTTCTTCAAGTGTTCCTAATAGTTTGCCCTCTCTGGTGAGAATGGAATCA
TTTGGCACCCAATCTGCCCTTGCTGAGCCTGGTCACTTACAGGGTCAGTT
AAAATTCGATATCCGAAGCACACCTAGTTTTCATCCTCATTCACTTCCAG
AGTGCCATGATGGTTTAAATAAGGGTGTTCGCTGCAATTCTTCGGGTACA
GGTTAGTGAGGGAGGAGCTCGGGACTAATTTTCTGACTGGGGAAAAAGTT
ACATCGCCCGGCGAGAAATTTGACAAAGTGTTTACAGCAATGTGCCAGGG
CAAGATCATTGATCCAATGCTGGAATGTCTCAGGGAATGGAATGGCGCCC
CTCTTCCAATATGCTAGTTGTTTTATTCTTAAGAATTCATTGAATTGCCG
ATGTGACTAAATGG
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