EG358193

Overview
NameEG358193
Unique NameEG358193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length464
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL3_PHAVU (Phenylalanine ammonia-lyase class 3 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.088e-17
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 1 
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPI 411
            Y+ VREELG   LTGEK  SP E+F+KV+TAMCQ KIIDP+LECL +WNG P+PI
Sbjct:  656 YKFVREELGIRLLTGEKALSPDEEFEKVYTAMCQAKIIDPILECLEDWNGVPIPI 710
[Close]
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=ZB8 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.088e-17
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 1 
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            YR VREELGT +LTGEK  SPGE+ +KV  A+ +GK IDP+LECL+EWNG PLPIC
Sbjct:  658 YRFVREELGTKYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNGEPLPIC 713
[Close]
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSI (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. indica GN=ZB8 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.088e-17
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 1 
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            YR VREELGT +LTGEK  SPGE+ +KV  A+ +GK IDP+LECL+EWNG PLPIC
Sbjct:  658 YRFVREELGTKYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNGEPLPIC 713
[Close]
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL3_ARATH (Phenylalanine ammonia-lyase 3 OS=Arabidopsis thaliana GN=PAL3 PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 2.425e-17
Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 1 
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 414
            YR VR EL T  LTGE V SPGE FDKVF A+ QGK+IDP+ ECL+EWNGAP+ IC
Sbjct:  639 YRFVRNELETRLLTGEDVRSPGEDFDKVFRAISQGKLIDPLFECLKEWNGAPISIC 694
[Close]
BLAST of EG358193 vs. ExPASy Swiss-Prot
Match: PAL1_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=PAL PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 4.136e-17
Identity = 39/55 (70.91%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:  247 YRLVREELGTNFLTGEKVTSPGEKFDKVFTAMCQGKIIDPMLECLREWNGAPLPI 411
            YR VREELG  FLTGEK+ SPGE+ +KVF  + QGK+IDPML+CL+EWNG PLPI
Sbjct:  646 YRFVREELGCVFLTGEKLKSPGEECNKVFLGISQGKLIDPMLDCLKEWNGEPLPI 700
The following BLAST results are available for this feature:
BLAST of EG358193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
PAL3_PHAVU1.088e-1769.09Phenylalanine ammonia-lyase class 3 OS=Phaseolus v... [more]
PAL2_ORYSJ1.088e-1769.64Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PAL2_ORYSI1.088e-1769.64Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PAL3_ARATH2.425e-1769.64Phenylalanine ammonia-lyase 3 OS=Arabidopsis thali... [more]
PAL1_ORYSJ4.136e-1770.91Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank description4g10 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl004g10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358193 ID=EG358193; Name=EG358193; organism=Citrus sinensis; type=EST; length=464bp
ACCCTCTGCTGTAAAGGCCCCACCTACGGAGCCTGCATTTCATCTGGGAA
TTTCTTCAAGTGTTCCTAATAGTTTGCCCTCTCTGGTGAGAATGGAATCA
TTTGGCACCCAATCTGCCCTTGCTGAGCCTGGTCACTTACAGGGTCAGTT
AAAATTCGATATCCGAAGCACACCTAGTTTTCATCCTCATTCACTTCCAG
AGTGCCATGATGGTTTAAATAAGGGTGTTCGCTGCAATTCTTCGGGTACA
GGTTAGTGAGGGAGGAGCTCGGGACTAATTTTCTGACTGGGGAAAAAGTT
ACATCGCCCGGCGAGAAATTTGACAAAGTGTTTACAGCAATGTGCCAGGG
CAAGATCATTGATCCAATGCTGGAATGTCTCAGGGAATGGAATGGCGCCC
CTCTTCCAATATGCTAGTTGTTTTATTCTTAAGAATTCATTGAATTGCCG
ATGTGACTAAATGG
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