CK939533

Overview
NameCK939533
Unique NameCK939533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939533 vs. ExPASy Swiss-Prot
Match: GALE_HUMAN (UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.498e-62
Identity = 122/237 (51.48%), Postives = 159/237 (67.09%), Query Frame = 3
Query:   96 KNILVTGGAGFIGTHCALQLLHGGFKVVLIDNLHN------SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFDAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM-NPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDG 785
            + +LVTGGAG+IG+H  L+LL  G+  V+IDN HN      S+PE++ RV++L G    + +EF   D+ ++  L +LF    F AVIHF  LKAV ESVQ P  Y+  NL GTI L + M  +  K LVFSSSAT+YG P+ +P  E  P G   NPYG++K + EE+  D+ +AD  W  +LLRYFNP GAH SG +GEDP+GIPNNLMPY+ QVA+GR   LNV+G DY T+DG
Sbjct:    3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG----RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235          
BLAST of CK939533 vs. ExPASy Swiss-Prot
Match: GALE_HAEIN (UDP-glucose 4-epimerase OS=Haemophilus influenzae GN=galE PE=3 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 4.359e-62
Identity = 119/229 (51.97%), Postives = 162/229 (70.74%), Query Frame = 3
Query:  102 ILVTGGAGFIGTHCALQLLHGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFDAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM-NPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDG 785
            ILVTGGAG+IG+H  ++LL+ G +VV++DNL NS P++++RVK + G    K+ +F+ GD+ ++  L K+F+  + ++VIHF  LKAV ESVQ P  Y+ NN+ GT+ L Q M K      VFSSSAT+YG P+ IP  ED   G   NPYG +K   E+I  D  KA+P++ + +LRYFNPVGAHESG +GEDP GIPNNL+PYI QVA+G+  +L+V+G DY T DG
Sbjct:    3 ILVTGGAGYIGSHTVVELLNVGKEVVVLDNLCNSSPKSLERVKQITG----KEAKFYEGDILDRALLQKIFAENEINSVIHFAGLKAVGESVQKPTEYYMNNVAGTLVLIQEMKKAGVWNFVFSSSATVYGDPKIIPITEDCEVGGTTNPYGTSKYMVEQILRDTAKAEPKFSMTILRYFNPVGAHESGLIGEDPNGIPNNLLPYISQVAIGKLAQLSVFGSDYDTHDG 227          
BLAST of CK939533 vs. ExPASy Swiss-Prot
Match: GALE_PASMU (UDP-glucose 4-epimerase OS=Pasteurella multocida GN=galE PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.163e-61
Identity = 119/229 (51.97%), Postives = 158/229 (69.00%), Query Frame = 3
Query:  102 ILVTGGAGFIGTHCALQLLHGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFDAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM-NPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDG 785
            ILVTGGAG+IG+H  ++LL+    VV++DNL NS P++++RV  + G    K+++F+ GD+ +   L K+F+  +  +VIHF  LKAV ESVQ P  Y+ NN+ G++ L Q M K      VFSSSAT+YG PE IP  E    G   NPYG +K   E+I  D+ KA PE+ I +LRYFNPVGAHESG +GEDP GIPNNL+PYI QVA+G+ P+L+V+G DY T DG
Sbjct:    3 ILVTGGAGYIGSHTVVELLNANKDVVVLDNLCNSSPKSLERVAQITG----KQVKFYQGDILDTALLQKIFAENQIQSVIHFAGLKAVGESVQKPAEYYMNNVTGSLVLIQEMKKAGVWNFVFSSSATVYGDPEIIPITESCKVGGTTNPYGTSKFMVEQILKDIAKATPEFSITILRYFNPVGAHESGLIGEDPNGIPNNLLPYISQVAIGKLPQLSVFGSDYETHDG 227          
BLAST of CK939533 vs. ExPASy Swiss-Prot
Match: GAL10_KLULA (Bifunctional protein GAL10 OS=Kluyveromyces lactis GN=GAL10 PE=2 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 5.329e-60
Identity = 116/238 (48.74%), Postives = 159/238 (66.81%), Query Frame = 3
Query:   84 MASEKNILVTGGAGFIGTHCALQLLHGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFDAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEK----IPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDG 785
            M+ +K  LVTGGAG+IG+H  ++L   G+K +++DNL NS  E+V R++ L G E+    +F   DL   + L+KLF   K D+V+HF  LKAV ES Q P  Y+ NN++GTINL + M  ++ KKLVFSSSAT+YG   +    IP  E  P G  NPYG+TK   E++  D+  +D  +   +LRYFNP+GAH SG +GEDP GIPNNL+P++ QVA+GR P+L V+G DY + DG
Sbjct:    1 MSEDKYCLVTGGAGYIGSHTVVELCEAGYKCIVVDNLSNSSYESVARMELLTGQEI----KFAKIDLCELEPLNKLFDDYKIDSVLHFAGLKAVGESTQIPLTYYFNNIVGTINLLECMKSHDVKKLVFSSSATVYGDATRFENMIPIPETCPTGPTNPYGKTKLTIEDMMRDLHFSDKSFSFAILRYFNPIGAHPSGVIGEDPLGIPNNLLPFMAQVAIGRRPKLYVFGDDYDSVDG 234          
BLAST of CK939533 vs. ExPASy Swiss-Prot
Match: GALE_ERWAM (UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 6.960e-60
Identity = 116/230 (50.43%), Postives = 154/230 (66.96%), Query Frame = 3
Query:   99 NILVTGGAGFIGTHCALQLLHGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFDAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM-NPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDG 785
            +ILVTGGAG+IG+H  L LL  G  VV++DNL N+  E+++RV+ L G    K   F  GDL ++  L  +FS+ +  AVIHF  LKAV  S + P  Y+ NN+ GT+ L + M      + +FSSSAT+YG    +P VE  P G   +PYG +K   E+I  D  KA+PE++ I LRYFNPVGAHESG++GEDP GIPNNL+PYI QVA+GR  +L ++G DYPT+DG
Sbjct:    2 SILVTGGAGYIGSHTVLSLLQRGDDVVILDNLSNASRESINRVEKLTG----KTATFFEGDLLDRSCLRSVFSAHRISAVIHFAGLKAVGASTRKPLEYYQNNVTGTLVLLEEMRSAGVNQFIFSSSATVYGADAPVPYVETTPIGGTTSPYGTSKLMVEQILRDYAKANPEFKTIALRYFNPVGAHESGQMGEDPNGIPNNLLPYIAQVAIGRLEKLGIFGDDYPTEDG 227          
BLAST of CK939533 vs. ExPASy Swiss-Prot
Match: GALE_YEREN (UDP-glucose 4-epimerase OS=Yersinia enterocolitica GN=galE PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.187e-59
Identity = 117/230 (50.87%), Postives = 154/230 (66.96%), Query Frame = 3
Query:   99 NILVTGGAGFIGTHCALQLLHGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFDAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM-NPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDG 785
            +IL+TGGAG+IG+H  L LL  G  VV++DNL NS  E++ RV  + G    +K  F+ GD+ ++  L  +FSS K D+VIHF  LK+V ESV+ P  Y+ NN++G+I L + M   N KKL+FSSSAT+YG+PE +P  E    G   NPYG +K   E+I  D   A P++ I  LRYFNPVGAH SG +GEDP G PNNL+P+I QVA+G+  +L VYG DY T DG
Sbjct:    2 SILITGGAGYIGSHTVLTLLEQGRNVVVLDNLINSSAESLARVSKICG----RKPNFYHGDILDRSCLKLIFSSHKIDSVIHFAGLKSVGESVEKPIEYYQNNVVGSITLLEEMCLANVKKLIFSSSATVYGEPEFVPLTEKARIGGTTNPYGTSKVMVEQILKDFSLAHPDYSITALRYFNPVGAHPSGLIGEDPNGKPNNLLPFITQVAIGKLSKLLVYGNDYDTPDG 227          
BLAST of CK939533 vs. ExPASy Swiss-Prot
Match: GALE_RAT (UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Gale PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.187e-59
Identity = 119/239 (49.79%), Postives = 156/239 (65.27%), Query Frame = 3
Query:   93 EKNILVTGGAGFIGTHCALQLLHGGFKVVLIDNLHNSV------PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFDAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFP--YGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDG 785
            E+ +LVTGGAG+IG+H  L+LL  G+  V+IDN HNS+      PE++ RV++L G    + +EF   D+ ++  L  LF    F AVIHF  LKAV ESVQ P  Y+  NL GTI L + M     K LVFSSSAT+YG+P  +P     P   G   PYG++K + EE+  D+ +AD  W  +LLRYF P+GAH S ++GEDP+GIPNNLMPY+ QVA+GR   LNV+G DY T+DG
Sbjct:    2 EEKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTG----RSVEFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAMGVKSLVFSSSATVYGKP--VPASGRGPPHRGCTKPYGKSKFFIEEMIQDLCRADTAWNAVLLRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDG 234          
BLAST of CK939533 vs. ExPASy Swiss-Prot
Match: GAL10_YEAST (Bifunctional protein GAL10 OS=Saccharomyces cerevisiae GN=GAL10 PE=1 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 2.645e-59
Identity = 114/238 (47.90%), Postives = 157/238 (65.97%), Query Frame = 3
Query:   87 ASEKNILVTGGAGFIGTHCALQLLHGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFDAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ----PEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPE-WRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDG 785
            ++ K +LVTGGAG+IG+H  ++L+  G+  V+ DNL NS  ++V R++ L        + F+  DL ++  L+K+F   K D+VIHF  LKAV ES Q P RY+ NN++GT+ L + M +YN  K VFSSSAT+YG     P  IP  E+ P G  NPYG TK   E I  D+  +D + W+  +LRYFNP+GAH SG +GEDP GIPNNL+PY+ QVAVGR  +L ++G DY ++DG
Sbjct:    9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT----KHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDG 242          
BLAST of CK939533 vs. ExPASy Swiss-Prot
Match: GAL10_SCHPO (Bifunctional protein gal10 OS=Schizosaccharomyces pombe GN=gal10 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.454e-59
Identity = 115/235 (48.94%), Postives = 159/235 (67.66%), Query Frame = 3
Query:   93 EKNILVTGGAGFIGTHCALQLLHGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFDAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEK----IPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDG 785
            ++ ILVTGGAG+IG+H  ++L++ G+KV+++DNL NS  +AV RV+ +    + K ++F   DLR+K+ L ++F + K   VIHF ALKAV ES++ P  Y+DNN+ GTI L   M ++  K +VFSSSAT+YG   +    IP  E  P    NPYG+TK   E I  D+  +D  WR  +LRYFNP+GAH SG LGEDP GIPNNL+P++ QVA+GR  +L V+G DY + DG
Sbjct:    5 DEYILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAVARVEFI----VRKSIKFFKLDLRDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVKTVVFSSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENIIKDLHTSDNTWRGAILRYFNPIGAHPSGLLGEDPLGIPNNLLPFLAQVAIGRREKLLVFGDDYDSHDG 235          
BLAST of CK939533 vs. ExPASy Swiss-Prot
Match: GALE_PASHA (UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.988e-58
Identity = 114/229 (49.78%), Postives = 158/229 (69.00%), Query Frame = 3
Query:  102 ILVTGGAGFIGTHCALQLLHGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFDAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM-NPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDG 785
            ILVTGGAG+IG+H  ++LL+   ++V++DNL NS   +++RVK + G    K ++F+ GD+ ++D L K+F+  + ++VIHF  LKAV E+ ++ +    NN+ G+I L + M K N   +VFSSSAT+YG P+ IP VE  P G   NPYG +K   E I  D  KA P+   ++LRYFN VGAHESG +GEDP GIPNNLMP+I QVAVG+ P+L+V+G DY T DG
Sbjct:    3 ILVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERVKQITG----KSVKFYQGDILDRDILRKIFAENQIESVIHFAGLKAVGETSENRYVTIKNNVTGSIVLVEEMLKANVNTIVFSSSATVYGDPQIIPIVESCPVGGTTNPYGTSKYMVERILEDTVKAFPQLSAVVLRYFNRVGAHESGLIGEDPNGIPNNLMPFISQVAVGKLPQLSVFGGDYNTHDG 227          
The following BLAST results are available for this feature:
BLAST of CK939533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
GALE_HUMAN1.498e-6251.48UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE... [more]
GALE_HAEIN4.359e-6251.97UDP-glucose 4-epimerase OS=Haemophilus influenzae ... [more]
GALE_PASMU2.163e-6151.97UDP-glucose 4-epimerase OS=Pasteurella multocida G... [more]
GAL10_KLULA5.329e-6048.74Bifunctional protein GAL10 OS=Kluyveromyces lactis... [more]
GALE_ERWAM6.960e-6050.43UDP-glucose 4-epimerase OS=Erwinia amylovora GN=ga... [more]
GALE_YEREN1.187e-5950.87UDP-glucose 4-epimerase OS=Yersinia enterocolitica... [more]
GALE_RAT1.187e-5949.79UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Ga... [more]
GAL10_YEAST2.645e-5947.90Bifunctional protein GAL10 OS=Saccharomyces cerevi... [more]
GAL10_SCHPO3.454e-5948.94Bifunctional protein gal10 OS=Schizosaccharomyces ... [more]
GALE_PASHA4.988e-5849.78UDP-glucose 4-epimerase OS=Pasteurella haemolytica... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004749_C10 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IF_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939533 ID=CK939533; Name=CK939533; organism=Citrus sinensis; type=EST; length=787bp
GGGGACTTTATTCATTTNNNTCTTTTTAATATAATCGTCGCTCTCACCTT
CTTTCCCCTTCTCCTCCAATCCTTTGCCTTGCAATGGCGTCAGAGAAAAA
TATCCTGGTGACCGGTGGAGCTGGCTTTATTGGAACGCACTGTGCGCTTC
AGCTTCTACATGGAGGGTTTAAGGTGGTGCTTATCGATAATTTACATAAC
TCTGTCCCTGAAGCTGTTGATAGAGTCAAGGACTTGGCGGGTCCTGAGCT
CGCTAAGAAGCTCGAGTTCCATGTGGGTGATCTTAGGAACAAGGATGACT
TGGATAAGCTTTTTTCTAGTCAAAAATTTGATGCTGTGATCCATTTTGGT
GCCCTTAAGGCTGTGGCAGAGAGTGTTCAACATCCTTTCCGTTATTTTGA
TAATAATTTGATTGGTACCATCAATCTGTATCAGGCCATGGCAAAATATA
ACTGTAAGAAGTTGGTATTTTCATCATCCGCAACTATCTATGGACAGCCT
GAAAAAATACCTTGTGTTGAGGACTTCCCGTATGGTGCTATGAATCCTTA
TGGACGAACTAAGCAATGGTGCGAAGAAATTGCTTTTGATGTTCAAAAGG
CAGACCCAGAATGGAGAATAATATTACTGAGGTACTTCAATCCTGTTGGT
GCTCATGAGAGTGGTAAACTCGGTGAAGATCCAAAGGGCATACCAAACAA
TCTCATGCCTTACATACAGCAAGTCGCCGTCGGCAGACATCCAGAGCTTA
ATGTTTATGGTCAGGATTATCCAACAAAGGATGGTAG
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