EG358190

Overview
NameEG358190
Unique NameEG358190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length466
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:45..510. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 5.656e-46
Identity = 79/115 (68.70%), Postives = 93/115 (80.87%), Query Frame = 2
Query:  122 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANK 466
            AFGWAA D SGVLSPFHFSRR  GE DVT K+  CG+CHSDLH IKN WG + YPI+PGHEIVG+ T+VG  V+KFK GD+VGVG ++GSC SC+SC  DLENYCPKV+ TY ++
Sbjct:    7 AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSR 121          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 8.167e-45
Identity = 79/119 (66.39%), Postives = 97/119 (81.51%), Query Frame = 2
Query:  101 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            E+E    AFGWAA+D+SG LSPF FSRR TGE++V  KV +CGICHSDLH +KNEW ++IYP+VPGHEI+G V+E+G+KVSKF +GDKVGVGC+V SC +C+SC  D ENYC K I TY
Sbjct:    7 EKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSSIYPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATY 125          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 2.376e-44
Identity = 78/121 (64.46%), Postives = 96/121 (79.34%), Query Frame = 2
Query:  104 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANK 466
            +EH K A GWAA+D SGVLSP++FSRRA  + DVT KV +CGICH+DLH++KN+WGN +YP+VPGHEIVGVVT VG+ V+KFK GD VGVG  VGSC +CDSC    ENYCP +++T   K
Sbjct:   77 EEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYCPTMVITSNGK 197          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 1.304e-42
Identity = 79/115 (68.70%), Postives = 87/115 (75.65%), Query Frame = 2
Query:  113 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            P  A G AA+D SG LSP   SRR+TG+ DV  K+ +CGICHSDLH IKNEW N  YP+VPGHEI GVVTE G  V+KFK GDKVGVGCMV SCHSCDSC   LEN+CP VI TY
Sbjct:    3 PTAAAGLAARDASGHLSPLTISRRSTGDDDVVIKILYCGICHSDLHSIKNEWKNATYPLVPGHEIAGVVTEAGKNVTKFKGGDKVGVGCMVNSCHSCDSCNQGLENHCPGVIFTY 117          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.703e-42
Identity = 73/112 (65.18%), Postives = 88/112 (78.57%), Query Frame = 2
Query:  122 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            AFGWAAKD SG LSPFHF+RR     DVT K+ +CG+CHSDLH +KN+WG T YP+VPGHEI G+VT+VGS V+KFK GD+VGVG +V SC  C+ C  DLE+YCPK + TY
Sbjct:    6 AFGWAAKDASGHLSPFHFTRRQNEADDVTLKILYCGVCHSDLHTVKNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTY 117          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 6.471e-42
Identity = 74/117 (63.25%), Postives = 91/117 (77.78%), Query Frame = 2
Query:  104 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMT 454
            +EH K A GWAA+D SGVLSP++FSRRA  + DVT KV +CGICH+DLH++KN+WGN +YP+VPGHEIVGVVT VG+ V+KFK GD VGVG  V SC  C+ C    ENYC K++ T
Sbjct:   77 EEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHIVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVASCRGCECCGNGYENYCAKMVTT 193          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.104e-41
Identity = 76/102 (74.51%), Postives = 85/102 (83.33%), Query Frame = 2
Query:  155 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYA 460
            +LSPF FSRRATG+ DV FKV +CG+CHSDLHM+KNEWG T YPIVPGHEIVG VTEVGSKV KFKVGD VGVGC+VGSC SC++C  D EN C K + TYA
Sbjct:    1 ILSPFKFSRRATGDNDVRFKVLYCGVCHSDLHMVKNEWGMTTYPIVPGHEIVGRVTEVGSKVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYA 102          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.104e-41
Identity = 75/111 (67.57%), Postives = 88/111 (79.28%), Query Frame = 2
Query:  122 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMT 454
            A GWAA+DTSG LSPF F+RR   E DVT KV +CGICH+DLH+IKNEWGN +YP+VPGHEIVGVVT VG+ V+KFK GD VGVG  V SC +CDSC    ENYCP +++T
Sbjct:    8 ALGWAARDTSGHLSPFSFTRRVQQEDDVTIKVLYCGICHTDLHIIKNEWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVDSCRACDSCGKGYENYCPTMVIT 118          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.220e-40
Identity = 73/114 (64.04%), Postives = 89/114 (78.07%), Query Frame = 2
Query:  116 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            + A G AA+D+SG LSPF  SRR+TG+ DV  K+  CGICHSDLH IKNEW ++IYP+VPGHEI GVVTEVG  V++FK GD+VGVGCMV SC SC+SC    EN+CP+ + TY
Sbjct:   14 QQAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTY 127          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.349e-39
Identity = 72/111 (64.86%), Postives = 85/111 (76.58%), Query Frame = 2
Query:  122 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMT 454
            A GWAA+D SG LSPF F+RR   E DVT KV +CGICH+DLH IKNEWGN +YP+VPGHEIVGVV  VG+ V++FK GD VGVG  V SC +CDSC    ENYCP +++T
Sbjct:    8 ALGWAARDASGHLSPFSFTRRVQEEDDVTIKVLYCGICHTDLHTIKNEWGNAMYPVVPGHEIVGVVAGVGAGVTRFKAGDTVGVGYFVDSCRACDSCGKGDENYCPTMVIT 118          
The following BLAST results are available for this feature:
BLAST of EG358190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
CADH2_ARATH5.656e-4668.70Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CADH6_ARATH8.167e-4566.39Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
CAD8B_ORYSJ2.376e-4464.46Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CADH5_ORYSJ1.304e-4268.70Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
MTDH1_STYHU1.703e-4265.18Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CAD8C_ORYSJ6.471e-4263.25Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
MTDH_PETCR1.104e-4174.51Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CAD8D_ORYSJ1.104e-4167.57Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
CADH3_ORYSJ1.220e-4064.04Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CAD8A_ORYSJ1.349e-3964.86Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]

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Properties
Property NameValue
Genbank description10h1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010h1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358190 ID=EG358190; Name=EG358190; organism=Citrus sinensis; type=EST; length=466bp
ACGCGGGGATCGCAACTTGTTTGTTCAAATACCCTGGACGTCAAACTAAG
CCAACAAACACCGATATCATTAAATTCATTCTGAAATGGGGCAAGCACCG
GAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCCAAGGACACTTC
TGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAACGGGAGAGAAGG
ATGTGACATTCAAAGTAACTCACTGTGGGATATGCCATTCAGATCTTCAC
ATGATAAAAAATGAATGGGGCAATACCATTTACCCAATCGTCCCCGGACA
TGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGTAAATTCA
AAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCATGCCACTCT
TGTGATAGCTGCGCCATTGATCTTGAGAACTACTGTCCCAAAGTTATAAT
GACCTATGCCAACAAG
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