CK939503

Overview
NameCK939503
Unique NameCK939503
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: SDCS_STAS1 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sdcS PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.576e-20
Identity = 48/128 (37.50%), Postives = 78/128 (60.94%), Query Frame = 1
Query:   46 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNLPEV 429
            +L +  W+  WW+TEA+P+  TS+ PL L P+  + + + V+  Y +D+I L LG FILA+A+E +N+H R+AL I         +   +LLG    T F+SM++ N AA +IM+P+   I++   E+
Sbjct:   61 VLAITLWIATWWITEAIPIAATSLLPLILLPVGHVLNPEEVSAQYGNDIIFLFLGGFILAIAMERWNLHTRVALRIINTL---GTSTGRILLGFMIATGFLSMFVSNTAAVMIMIPIGLAIIKEANEL 185          

HSP 2 Score: 87.4261 bits (215), Expect = 9.777e-17
Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = 3
Query:  453 EALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALA----FLMP 785
            E L  +E    L I  ++ +    +TE TSN AT T++LP+L  ++  ++VHPLLLMVP A+ A  +++LP GTP N + F TG I I+ M   G  + +  I  +     FL+P
Sbjct:  391 EQLKLIEGVSPLVIVLVITIFVLFLTEITSNTATATMILPILATLSVAVNVHPLLLMVPAAMAANCAYMLPVGTPPNAIVFGTGKISIKKMASVGFWVNLLSIVVIVLVVYFLVP 505          
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: S13A5_MOUSE (Solute carrier family 13 member 5 OS=Mus musculus GN=Slc13a5 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.282e-20
Identity = 49/122 (40.16%), Postives = 75/122 (61.48%), Query Frame = 1
Query:   55 VLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 420
            V+  +  +W T+ +P+ +TS+ P+ LFPL  +  +  V   YM D   L LGS I+A+AVE + +HKR+AL + +LF G    P  L+LG    TAF+SMW+ N AA  +M+P+   +LQ +
Sbjct:   41 VIVIMAVYWCTDVIPVAVTSLLPVLLFPLLKVLDSKQVCIQYMKDTNMLFLGSLIVAVAVERWKLHKRVALRM-LLFVG--TKPSRLMLGFMFVTAFLSMWISNTAATAMMIPIVEAMLQQM 159          

HSP 2 Score: 85.8853 bits (211), Expect = 2.845e-16
Identity = 41/96 (42.71%), Postives = 62/96 (64.58%), Query Frame = 3
Query:  507 CLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLG 794
            CL+ A+ TE TSN ATTTL LP+   +A+++ +HPL +M+P  + A  +F+LP  TP N + F  GH+ + DM+KTGL +   GI ++   + T G
Sbjct:  458 CLV-AMTTECTSNVATTTLFLPIFASMARSIGIHPLYVMIPCTMSASLAFMLPVATPPNAIVFAYGHLRVVDMMKTGLIMNFVGILSVFLSVNTWG 552          
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: INDY1_DROME (Protein I'm not dead yet OS=Drosophila melanogaster GN=Indy PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 7.282e-20
Identity = 51/140 (36.43%), Postives = 80/140 (57.14%), Query Frame = 1
Query:    4 CVCVKLDGQATSRNMLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALN-ITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 420
            C+ V L  +      + +L  +  +W+TEA+P+ +TSM P+  FP+ GI S+D     Y  D + + +G  ++ALAVE+ N+HKRLAL  I I+ C    +P  L  G+   T F+SMW+ N A   +M P+   +L+ L
Sbjct:   53 CLPVMLLNEGAEFRCMYLLLVMAIFWVTEALPLYVTSMIPIVAFPIMGIMSSDQTCRLYFKDTLVMFMGGIMVALAVEYCNLHKRLALRVIQIVGC----SPRRLHFGLIMVTMFLSMWISNAACTAMMCPIIQAVLEEL 188          
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: S13A5_RAT (Solute carrier family 13 member 5 OS=Rattus norvegicus GN=Slc13a5 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.164e-19
Identity = 48/122 (39.34%), Postives = 73/122 (59.84%), Query Frame = 1
Query:   55 VLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 420
            V+  +  +W T+ +P+ ITS+ P+ LFPL  +  +  V   YM D   L LGS I+A AVE + +HKR+AL + +LF G    P  L+LG    TAF+SMW+ N A   +M+P+   +L+ +
Sbjct:   41 VIILMAIYWCTDVIPVAITSLLPVLLFPLLKVLDSKQVCVQYMTDTNMLFLGSLIVATAVERWELHKRIALRM-LLFVG--TKPSRLMLGFMFVTAFLSMWISNTATTAMMIPIVEAMLEQM 159          

HSP 2 Score: 91.2781 bits (225), Expect = 6.770e-18
Identity = 44/101 (43.56%), Postives = 66/101 (65.35%), Query Frame = 3
Query:  492 IAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLG 794
            I  I+  I A+ TE TSN ATTTL LP+   +A+++ +HPL +M+P  + A  +F+LP  TP N + F  GH+++ DM+KTGL + I GIA++   + T G
Sbjct:  452 ITLILSCIVAMTTECTSNVATTTLFLPIFASMARSIGIHPLYVMIPCTLSASLAFMLPVATPPNAIVFAYGHLKVIDMVKTGLVMNILGIASVFLSVNTWG 552          
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: NAD1_CAEEL (Sodium-dependent low-affinity dicarboxylate transporter 1 OS=Caenorhabditis elegans GN=nac-1 PE=2 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 6.164e-19
Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 1
Query:   22 DGQATSRNMLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNLPEVPLQSTLV----------RKHWISWRR 477
            D        L  +A + ++W+ EA+P+ IT+  P+ LFPLFGI  ++ VA +Y+ D   L +G  ++ALAVE   +H R+AL +      EP     ++ G  G T F+SMW+ N A   +M+P+   ++  L        LV          RKH +  RR
Sbjct:   36 DSHGLQAKCLYCVAVMGSYWVFEALPLAITAFIPMILFPLFGIMRSEEVARAYLPDTCFLFMGGLMVALAVEKCELHARVALFVLKTVGSEPAR---VMAGFMGVTGFLSMWISNTATTALMVPILQSVITELVSNHRMEDLVALCEAHHNSSRKHSVGMRR 194          

HSP 2 Score: 68.9366 bits (167), Expect = 3.598e-11
Identity = 35/111 (31.53%), Postives = 64/111 (57.66%), Query Frame = 3
Query:  465 FLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGA 797
            +L+   +  I  I  +IS  +T   SN    ++ +P++ ++A+++ + PL  M+P  I A F+FLLP  TP N + F++G++++ DM  +GL + + G   L+ L   L A
Sbjct:  434 YLDVFNHNIIMLICIIISVTLTNVCSNTVIASIFIPIVAELARSLEIDPLNFMLPVTISASFAFLLPVATPPNAIVFSSGYLKVFDMFVSGLCVTL-GCVVLSMLNMLLWA 543          
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: S13A4_HUMAN (Solute carrier family 13 member 4 OS=Homo sapiens GN=SLC13A4 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18
Identity = 39/109 (35.78%), Postives = 69/109 (63.30%), Query Frame = 3
Query:  468 LEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLG 794
            L + P  A+  + C++ +I+TEF SN AT T+ LP+L  +++T+H++PL  ++P  +   F+ +LP G P N + F+ GH +I+DM+K GL + + G+  +   + T G
Sbjct:  496 LSSLPPWAVTLLACILVSIVTEFVSNPATITIFLPILCSLSETLHINPLYTLIPVTMCISFAVMLPVGNPPNAIVFSYGHCQIKDMVKAGLGVNVIGLVIVMVAINTWG 604          

HSP 2 Score: 88.1965 bits (217), Expect = 5.770e-17
Identity = 44/122 (36.07%), Postives = 71/122 (58.20%), Query Frame = 1
Query:   55 VLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 420
            VL     +W++EAVP+   ++ P FL+P FG+  ++ VA  Y  +   L++G   +A AVE +N+HKR+AL + +L  G    P +LLL     T  +SMW+ N +   ++MP+   +LQ L
Sbjct:   40 VLIVTAVYWVSEAVPLGAAALVPAFLYPFFGVLRSNEVAAEYFKNTTLLLVGVICVAAAVEKWNLHKRIALRM-VLMAG--AKPGMLLLCFMCCTTLLSMWLSNTSTTAMVMPIVEAVLQEL 158          
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: S13A2_RAT (Solute carrier family 13 member 2 OS=Rattus norvegicus GN=Slc13a2 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.590e-17
Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = 1
Query:   79 WLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 420
            W TEA+P+ +T + P+ LF L GI  A      Y  D   L +G  ++A+AVEH+N+HKR+AL + ++     +   LLLLG    TAF+SMW+ N A   +M+P+   +L+ L
Sbjct:   49 WCTEALPLAVTVLFPIVLFLLMGIMDASE-GLEYFKDTNILFVGGLMVAIAVEHWNLHKRIALQVLLII---GVRAALLLLGFMLVTAFLSMWISNTATTAMMVPIGHAVLEQL 158          

HSP 2 Score: 88.9669 bits (219), Expect = 3.360e-17
Identity = 44/100 (44.00%), Postives = 64/100 (64.00%), Query Frame = 3
Query:  468 LEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAA 767
            L+  P  A A I+CL+ AI TE TSN ATTTL LP+L  +A+ + +HPL +M+P  + A  +F+LP  TP N + F+ G +++ DM + G  L I G+ A
Sbjct:  446 LQHIPPSATAVILCLLIAIFTECTSNVATTTLFLPILASMAQAICLHPLYVMLPCTLAASLAFMLPVATPPNAIVFSFGGLKVSDMARAGFLLNIIGVLA 545          
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: NAD3_CAEEL (Sodium-dependent high-affinity dicarboxylate transporter 3 OS=Caenorhabditis elegans GN=nac-3 PE=2 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 9.842e-17
Identity = 41/118 (34.75%), Postives = 71/118 (60.17%), Query Frame = 1
Query:   67 VFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 420
            +  +W++E +P+ +T+M P+ LFPL G+  A+T A  YM+D   L +G  I+A AVE  ++H+R+AL++      E   P  ++LG    TA +S ++ N A   +M+P+   ++Q L
Sbjct:   84 IAVYWMSEVMPLAVTAMLPVVLFPLVGVLDANTTAKEYMNDTNFLFIGGLIMAAAVEKCDLHERVALSVLRCVGSE---PKWIMLGFMTVTALLSSFISNTATTAMMVPIGQSVVQQL 198          
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: INDY2_DROME (Protein I'm not dead yet 2 OS=Drosophila melanogaster GN=Indy-2 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.856e-15
Identity = 37/114 (32.46%), Postives = 63/114 (55.26%), Query Frame = 1
Query:   79 WLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 420
            W+TE +P+ +T++ PL   PL G+ +A  V   Y  D I + LG  I+AL +E+ N+H R+AL +  +  G P     L +G+   + F+ +W+ N A   +M P+   ++  L
Sbjct:   60 WITETLPIYVTALFPLVFCPLLGLVNASIVCKQYFTDTIVVFLGGLIVALGIEYSNLHTRIALRVIRIVGGSPRR---LFVGLMSVSTFMGLWISNSAGTAMMCPIVKALVNEL 170          
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: YKG6_CAEEL (Uncharacterized transporter B0285.6 OS=Caenorhabditis elegans GN=B0285.6 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.477e-14
Identity = 41/121 (33.88%), Postives = 69/121 (57.02%), Query Frame = 3
Query:  426 GSSSINPC*EALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPT 788
            G SS+  C      +   P+  +  I+ ++  ++TEF++N+AT ++ +P+  ++A+ +  HPL   +P AIG  FSF+LP  TP+N + + T  I + DM+  G+ L I  IA  A  M T
Sbjct:  428 GLSSLIAC-SLNSTISKMPFFVMQIILSIVVVVMTEFSTNSATASIFIPISFKMAEAVGAHPLYFSIPTAIGPSFSFMLPMATPANAIVYETKTIRMIDMVSCGVFLNIFCIAITAINMNT 547          

HSP 2 Score: 78.9518 bits (193), Expect = 3.500e-14
Identity = 40/122 (32.79%), Postives = 66/122 (54.10%), Query Frame = 1
Query:   55 VLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 420
            V+  +  +W+ E VP+ +TS  P+   P  GI S   VA  Y  D   +   S +L+LAVE   +HKR+AL + + + G    P  L+ G    T+F+S+W+ + A   +M P+A  +L+ +
Sbjct:   45 VILTMSCYWVAEVVPLAVTSFIPMIALPFLGIVSIKEVAPKYFADTNIVFFNSLMLSLAVEECQLHKRIALKM-LTYVG--TRPHWLMAGFMIITSFISLWISDTACCALMAPIAYALLEEI 163          
The following BLAST results are available for this feature:
BLAST of CK939503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
SDCS_STAS15.576e-2037.50Sodium-dependent dicarboxylate transporter sdcS OS... [more]
S13A5_MOUSE7.282e-2040.16Solute carrier family 13 member 5 OS=Mus musculus ... [more]
INDY1_DROME7.282e-2036.43Protein I'm not dead yet OS=Drosophila melanogaste... [more]
S13A5_RAT6.164e-1939.34Solute carrier family 13 member 5 OS=Rattus norveg... [more]
NAD1_CAEEL6.164e-1932.72Sodium-dependent low-affinity dicarboxylate transp... [more]
S13A4_HUMAN3.969e-1835.78Solute carrier family 13 member 4 OS=Homo sapiens ... [more]
S13A2_RAT2.590e-1739.47Solute carrier family 13 member 2 OS=Rattus norveg... [more]
NAD3_CAEEL9.842e-1734.75Sodium-dependent high-affinity dicarboxylate trans... [more]
INDY2_DROME1.856e-1532.46Protein I'm not dead yet 2 OS=Drosophila melanogas... [more]
YKG6_CAEEL3.477e-1433.88Uncharacterized transporter B0285.6 OS=Caenorhabdi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004749_F11 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939503 ID=CK939503; Name=CK939503; organism=Citrus sinensis; type=EST; length=799bp
GGGTGTGTATGTGTGAAGCTCGATGGGCAGGCGACAAGCAGGAACATGTT
GGGTGTTCTTGCTTGGGTCTTCGCTTGGTGGCTCACGGAGGCCGTACCCA
TGCCCATTACCTCTATGGCGCCTCTGTTTCTGTTTCCTCTGTTTGGTATC
TCTTCTGCTGACACCGTTGCTCATTCTTACATGGATGATGTTATTGCCCT
CGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAACATTC
ACAAAAGATTGGCCTTAAATATAACTATTCTATTCTGTGGAGAGCCAATG
AATCCGCCCTTGCTGCTTCTTGGGATATGTGGCACGACAGCATTCGTGAG
CATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGTGGCCA
CTGGGATCTTACAGAACTTGCCAGAGGTTCCTCTTCAATCAACCCTTGTT
AGGAAGCATTGGATTTCCTGGAGGCGGCGCCATATTTAGCCATTGCACCT
ATCGTATGTCTGATTAGCGCGATTATTACTGAATTCACATCAAATAATGC
CACAACAACTCTCGTTCTTCCACTTCTGATCCAAATAGCAAAAACTATGC
ATGTTCATCCATTGCTTCTTATGGTTCCTGGAGCAATTGGAGCACAATTT
TCTTTCTTGTTGCCGACTGGAACCCCTTCAAATATTGTTGGATTCACAAC
CGGGCACATCGAAATTCAAGATATGATCAAGACAGGGCTGCCCCTTAAGA
TTGCTGGCATTGCTGCTCTGGCCTTTCTAATGCCTACACTTGGTGCTTA
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