EG358189

Overview
NameEG358189
Unique NameEG358189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length466
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:45..510. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.646e-45
Identity = 79/115 (68.70%), Postives = 92/115 (80.00%), Query Frame = 2
Query:  122 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANK 466
            AFGWAA D SGVLSPFHFSRR  GE DVT K   CG+CHSDLH IKN WG + YPI+PGHEIVG+ T+VG  V+KFK GD+VGVG ++GSC SC+SC  DLENYCPKV+ TY ++
Sbjct:    7 AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSR 121          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 2.376e-44
Identity = 78/119 (65.55%), Postives = 96/119 (80.67%), Query Frame = 2
Query:  101 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            E+E    AFGWAA+D+SG LSPF FSRR TGE++V  K  +CGICHSDLH +KNEW ++IYP+VPGHEI+G V+E+G+KVSKF +GDKVGVGC+V SC +C+SC  D ENYC K I TY
Sbjct:    7 EKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSSIYPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATY 125          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 6.914e-44
Identity = 77/121 (63.64%), Postives = 95/121 (78.51%), Query Frame = 2
Query:  104 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANK 466
            +EH K A GWAA+D SGVLSP++FSRRA  + DVT K  +CGICH+DLH++KN+WGN +YP+VPGHEIVGVVT VG+ V+KFK GD VGVG  VGSC +CDSC    ENYCP +++T   K
Sbjct:   77 EEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYCPTMVITSNGK 197          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 3.794e-42
Identity = 79/115 (68.70%), Postives = 86/115 (74.78%), Query Frame = 2
Query:  113 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            P  A G AA+D SG LSP   SRR+TG+ DV  K  +CGICHSDLH IKNEW N  YP+VPGHEI GVVTE G  V+KFK GDKVGVGCMV SCHSCDSC   LEN+CP VI TY
Sbjct:    3 PTAAAGLAARDASGHLSPLTISRRSTGDDDVVIKILYCGICHSDLHSIKNEWKNATYPLVPGHEIAGVVTEAGKNVTKFKGGDKVGVGCMVNSCHSCDSCNQGLENHCPGVIFTY 117          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 4.955e-42
Identity = 73/112 (65.18%), Postives = 87/112 (77.68%), Query Frame = 2
Query:  122 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            AFGWAAKD SG LSPFHF+RR     DVT K  +CG+CHSDLH +KN+WG T YP+VPGHEI G+VT+VGS V+KFK GD+VGVG +V SC  C+ C  DLE+YCPK + TY
Sbjct:    6 AFGWAAKDASGHLSPFHFTRRQNEADDVTLKILYCGVCHSDLHTVKNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTY 117          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 1.883e-41
Identity = 73/117 (62.39%), Postives = 90/117 (76.92%), Query Frame = 2
Query:  104 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMT 454
            +EH K A GWAA+D SGVLSP++FSRRA  + DVT K  +CGICH+DLH++KN+WGN +YP+VPGHEIVGVVT VG+ V+KFK GD VGVG  V SC  C+ C    ENYC K++ T
Sbjct:   77 EEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHIVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVASCRGCECCGNGYENYCAKMVTT 193          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 3.212e-41
Identity = 75/102 (73.53%), Postives = 84/102 (82.35%), Query Frame = 2
Query:  155 VLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYA 460
            +LSPF FSRRATG+ DV FK  +CG+CHSDLHM+KNEWG T YPIVPGHEIVG VTEVGSKV KFKVGD VGVGC+VGSC SC++C  D EN C K + TYA
Sbjct:    1 ILSPFKFSRRATGDNDVRFKVLYCGVCHSDLHMVKNEWGMTTYPIVPGHEIVGRVTEVGSKVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYA 102          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 3.212e-41
Identity = 74/111 (66.67%), Postives = 87/111 (78.38%), Query Frame = 2
Query:  122 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMT 454
            A GWAA+DTSG LSPF F+RR   E DVT K  +CGICH+DLH+IKNEWGN +YP+VPGHEIVGVVT VG+ V+KFK GD VGVG  V SC +CDSC    ENYCP +++T
Sbjct:    8 ALGWAARDTSGHLSPFSFTRRVQQEDDVTIKVLYCGICHTDLHIIKNEWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVDSCRACDSCGKGYENYCPTMVIT 118          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 3.551e-40
Identity = 73/114 (64.04%), Postives = 88/114 (77.19%), Query Frame = 2
Query:  116 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            + A G AA+D+SG LSPF  SRR+TG+ DV  K   CGICHSDLH IKNEW ++IYP+VPGHEI GVVTEVG  V++FK GD+VGVGCMV SC SC+SC    EN+CP+ + TY
Sbjct:   14 QQAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTY 127          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 3.926e-39
Identity = 71/111 (63.96%), Postives = 84/111 (75.68%), Query Frame = 2
Query:  122 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMT 454
            A GWAA+D SG LSPF F+RR   E DVT K  +CGICH+DLH IKNEWGN +YP+VPGHEIVGVV  VG+ V++FK GD VGVG  V SC +CDSC    ENYCP +++T
Sbjct:    8 ALGWAARDASGHLSPFSFTRRVQEEDDVTIKVLYCGICHTDLHTIKNEWGNAMYPVVPGHEIVGVVAGVGAGVTRFKAGDTVGVGYFVDSCRACDSCGKGDENYCPTMVIT 118          
The following BLAST results are available for this feature:
BLAST of EG358189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
CADH2_ARATH1.646e-4568.70Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CADH6_ARATH2.376e-4465.55Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
CAD8B_ORYSJ6.914e-4463.64Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CADH5_ORYSJ3.794e-4268.70Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
MTDH1_STYHU4.955e-4265.18Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CAD8C_ORYSJ1.883e-4162.39Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
MTDH_PETCR3.212e-4173.53Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CAD8D_ORYSJ3.212e-4166.67Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
CADH3_ORYSJ3.551e-4064.04Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CAD8A_ORYSJ3.926e-3963.96Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]

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Properties
Property NameValue
Genbank description1d1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001d1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358189 ID=EG358189; Name=EG358189; organism=Citrus sinensis; type=EST; length=466bp
ACGCGGGGATCGCAACTTGTTTGTTCAAATACCCTGGACGTCAAACTAAG
CCAACAAACACCGATATCATTAAATTCATTCTGAAATGGGGCAAGCACCG
GAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCCAAGGACACTTC
TGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAACGGGAGAGAAGG
ATGTGACATTCAAAGCAACTCACTGTGGGATATGCCATTCAGATCTTCAC
ATGATAAAAAATGAATGGGGCAATACCATTTACCCAATCGTCCCCGGACA
TGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGTAAATTCA
AAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCATGCCACTCT
TGTGATAGTTGCGCCATTGATCTTGAGAACTACTGCCCCAAAGTTATAAT
GACCTATGCCAACAAG
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