EG358189

Overview
NameEG358189
Unique NameEG358189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length466
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:45..510. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.087e-32
Identity = 62/114 (54.39%), Postives = 82/114 (71.93%), Query Frame = 2
Query:  116 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            +   G AAKD SG+L+P+ ++ R TG  DV  K  +CG+CHSDLH IKN+ G + YP+VPGHE+VG V EVGS V++FKVG+ VGVG +VG C SC +C  ++E YC K I +Y
Sbjct:    9 RTTVGLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSY 122          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.725e-32
Identity = 64/124 (51.61%), Postives = 81/124 (65.32%), Query Frame = 2
Query:   86 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            MG     E  K   GWAA+D +G LSP+ ++ R TG +DV  K  +CGICH+DLH  KN  G + YP+VPGHE+VG V EVG +VSK+ VGD VGVG +VG C  C  C  ++E YC K I +Y
Sbjct:    1 MGSVDASE--KTITGWAARDATGHLSPYTYNLRRTGAEDVVLKVLYCGICHTDLHQTKNHLGASKYPMVPGHEVVGEVVEVGPEVSKYSVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSY 122          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.766e-31
Identity = 58/114 (50.88%), Postives = 78/114 (68.42%), Query Frame = 2
Query:  116 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            K   GWAA+D SG L+P++++ R TG +DV  K  +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+  GD VGVG +VG C  C  C  ++E YC K I +Y
Sbjct:    8 KTVTGWAARDASGHLTPYNYTLRKTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYSAGDVVGVGVIVGCCRECHPCKANVEQYCNKRIWSY 121          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.307e-31
Identity = 58/114 (50.88%), Postives = 78/114 (68.42%), Query Frame = 2
Query:  116 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            +   GWAA+D +G LSP+ ++ R TG +DV  K  +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+ VGD VGVG +VG C  C  C  ++E YC K I +Y
Sbjct:    8 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSY 121          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.935e-31
Identity = 57/114 (50.00%), Postives = 79/114 (69.30%), Query Frame = 2
Query:  116 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            +   GWAA+D +G L+P+ ++ R+TG +DV  K  +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+ VGD VGVG +VG C  C  C  ++E YC K I +Y
Sbjct:    8 RKVVGWAARDATGHLAPYTYTLRSTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYGVGDVVGVGVIVGCCRECKPCKANVEQYCNKKIWSY 121          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 9.072e-28
Identity = 52/100 (52.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query:  158 LSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            L P   +RR  G  DV  +  +CG+CHSDLH +++EW  T+YP VPGHEIVG V  VG +V K+  GD VGVGC+V SC  C+ C   LENYC  +  TY
Sbjct:   15 LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTY 114          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 5.880e-27
Identity = 53/109 (48.62%), Postives = 73/109 (66.97%), Query Frame = 2
Query:  131 WAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTY 457
            WAA+D SG+LSP   +RR+    DV+   THCG+C++D+   +N+ G++ YP+VPGHEI G+VT+VG  V +FKVGD VGVG  V SC  C+ C    E  C K + T+
Sbjct:   14 WAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTF 122          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.235e-26
Identity = 55/110 (50.00%), Postives = 69/110 (62.73%), Query Frame = 2
Query:  131 WAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYC-PKVIMTY 457
            +AA   +  L+    +RR  G  DV       GICHSD+H +K EWG   YP+VPGHEI GVVT VGS+V+K++ GD+VGVGC V SC  C+SC   +E YC P    TY
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTY 116          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.235e-26
Identity = 55/110 (50.00%), Postives = 69/110 (62.73%), Query Frame = 2
Query:  131 WAAKDTSGVLSPFHFSRRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYC-PKVIMTY 457
            +AA   +  L+    +RR  G  DV       GICHSD+H +K EWG   YP+VPGHEI GVVT VGS+V+K++ GD+VGVGC V SC  C+SC   +E YC P    TY
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTY 116          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.148e-22
Identity = 50/94 (53.19%), Postives = 60/94 (63.83%), Query Frame = 2
Query:  179 RRATGEKDVTFKATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPK-VIMTY 457
            RR     DV       GICHSD+H   +EWG  I+P+VPGHEI GVVT VG+KV+K  VGD+VGVGC V SC  C+ C    E +C K V+ TY
Sbjct:   26 RRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTY 119          
The following BLAST results are available for this feature:
BLAST of EG358189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
CADH_MEDSA2.087e-3254.39Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH_LOLPR2.725e-3251.61Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH2_ORYSJ1.766e-3150.88Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH_MAIZE2.307e-3150.88Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH_SACOF3.935e-3150.00Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
YAHK_ECOLI9.072e-2852.00Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
CADH1_ARATH5.880e-2748.62Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHC_MYCTU2.235e-2650.00NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO2.235e-2650.00NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHA_BACSU1.148e-2253.19Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]

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Properties
Property NameValue
Genbank description1d1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001d1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358189 ID=EG358189; Name=EG358189; organism=Citrus sinensis; type=EST; length=466bp
ACGCGGGGATCGCAACTTGTTTGTTCAAATACCCTGGACGTCAAACTAAG
CCAACAAACACCGATATCATTAAATTCATTCTGAAATGGGGCAAGCACCG
GAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCCAAGGACACTTC
TGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAACGGGAGAGAAGG
ATGTGACATTCAAAGCAACTCACTGTGGGATATGCCATTCAGATCTTCAC
ATGATAAAAAATGAATGGGGCAATACCATTTACCCAATCGTCCCCGGACA
TGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGTAAATTCA
AAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCATGCCACTCT
TGTGATAGTTGCGCCATTGATCTTGAGAACTACTGCCCCAAAGTTATAAT
GACCTATGCCAACAAG
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