EG358189

Overview
NameEG358189
Unique NameEG358189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length466
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:45..510. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: ADH4_KLULA (Alcohol dehydrogenase 4, mitochondrial OS=Kluyveromyces lactis GN=ADH4 PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 3.463e-11
Identity = 29/80 (36.25%), Postives = 44/80 (55.00%), Query Frame = 2
Query:  200 DVTFKATHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYC 436
            ++     + G+CH+DLH  K +W   +  P+V GHE  G+V   G  V  F++GD  G+  + GSC SC+ C    E+ C
Sbjct:   60 EILINVKYSGVCHTDLHAWKGDWPLPVKLPLVGGHEGAGIVVAKGENVKNFEIGDYAGIKWLNGSCMSCELCEQGYESNC 139          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: ADH2_YEAST (Alcohol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=ADH2 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 3.463e-11
Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 2
Query:  200 DVTFKATHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCP 439
            ++     + G+CH+DLH    +W   T  P+V GHE  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP
Sbjct:   33 ELLINVKYSGVCHTDLHAWHGDWPLPTKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCP 113          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.463e-11
Identity = 31/82 (37.80%), Postives = 48/82 (58.54%), Query Frame = 2
Query:  200 DVTFKATHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPK 442
            ++     + G+CH+DLH  K +W  +T  P+V GHE  GVV  +GS V+ +++GD  G+  + GSC +C+ C    E  C K
Sbjct:   33 EILINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCAK 114          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.523e-11
Identity = 32/83 (38.55%), Postives = 45/83 (54.22%), Query Frame = 2
Query:  191 GEKDVTFKATHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYC 436
            G   V  K    G+CH+DLH  K +W      P +PGHE VG V ++G++V++ K GD+VGV  +  +C  C  C    E  C
Sbjct:   26 GPGQVLIKYEATGVCHTDLHAAKGDWPVRPNPPFIPGHEGVGYVAKLGAEVTRLKEGDRVGVPWLHTACGCCTPCRTGWETLC 108          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: ADH1_YEAST (Alcohol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=ADH1 PE=1 SV=4)

HSP 1 Score: 67.0106 bits (162), Expect = 4.523e-11
Identity = 29/81 (35.80%), Postives = 46/81 (56.79%), Query Frame = 2
Query:  200 DVTFKATHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCP 439
            ++     + G+CH+DLH    +W   +  P+V GHE  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP
Sbjct:   33 ELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCP 113          
BLAST of EG358189 vs. ExPASy Swiss-Prot
Match: ADH_STAEQ (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adh PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 2
Query:  212 KATHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVI 448
            K  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   KVGD+V +  M  +C +C+ C    E  C  V+
Sbjct:   30 KTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGRVIEVADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVL 107          
The following BLAST results are available for this feature:
BLAST of EG358189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
ADH4_KLULA3.463e-1136.25Alcohol dehydrogenase 4, mitochondrial OS=Kluyvero... [more]
ADH2_YEAST3.463e-1137.04Alcohol dehydrogenase 2 OS=Saccharomyces cerevisia... [more]
ADH1_PICST3.463e-1137.80Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]
ADHA_RHIME4.523e-1138.55Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
ADH1_YEAST4.523e-1135.80Alcohol dehydrogenase 1 OS=Saccharomyces cerevisia... [more]
ADH_STAEQ5.908e-1136.71Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]

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Properties
Property NameValue
Genbank description1d1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001d1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358189 ID=EG358189; Name=EG358189; organism=Citrus sinensis; type=EST; length=466bp
ACGCGGGGATCGCAACTTGTTTGTTCAAATACCCTGGACGTCAAACTAAG
CCAACAAACACCGATATCATTAAATTCATTCTGAAATGGGGCAAGCACCG
GAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCCAAGGACACTTC
TGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAACGGGAGAGAAGG
ATGTGACATTCAAAGCAACTCACTGTGGGATATGCCATTCAGATCTTCAC
ATGATAAAAAATGAATGGGGCAATACCATTTACCCAATCGTCCCCGGACA
TGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGTAAATTCA
AAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCATGCCACTCT
TGTGATAGTTGCGCCATTGATCTTGAGAACTACTGCCCCAAAGTTATAAT
GACCTATGCCAACAAG
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