CK939496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939496 vs. ExPASy Swiss-Prot
Match: RR3_GOSBA (30S ribosomal protein S3, chloroplastic OS=Gossypium barbadense GN=rps3 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.402e-17 Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 1 Query: 25 MGQXXNPLGFRLGTTQSHHSLWFAKPKNYCEGLQEDQKIRNFIKNYIKK 171 MGQ NPLGFRLGTTQSHHSLWFA+PK Y EGLQED+KIR+ IKNY++K Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLQEDKKIRDCIKNYVQK 49
BLAST of CK939496 vs. ExPASy Swiss-Prot
Match: RR3_CUSRE (Plastid 30S ribosomal protein S3 OS=Cuscuta reflexa GN=rps3 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.402e-17 Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1 Query: 25 MGQXXNPLGFRLGTTQSHHSLWFAKPKNYCEGLQEDQKIRNFIKNYIKK 171 MGQ NPLGFRLGTTQ HHSLWF++PKNY E LQED+KIR+FI NY+KK Sbjct: 1 MGQKINPLGFRLGTTQDHHSLWFSQPKNYSESLQEDKKIRDFINNYVKK 49
BLAST of CK939496 vs. ExPASy Swiss-Prot
Match: RR3_WHEAT (30S ribosomal protein S3, chloroplastic OS=Triticum aestivum GN=rps3 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.831e-17 Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 1 Query: 25 MGQXXNPLGFRLGTTQSHHSLWFAKPKNYCEGLQEDQKIRNFIKNYIKK 171 MGQ NPLGFRLGTTQ HHS WFA+PKNY EGLQED+KIR+ IKNYI+K Sbjct: 1 MGQKINPLGFRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQK 49
BLAST of CK939496 vs. ExPASy Swiss-Prot
Match: RR3_SOLTU (30S ribosomal protein S3, chloroplastic OS=Solanum tuberosum GN=rps3 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.831e-17 Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 1 Query: 25 MGQXXNPLGFRLGTTQSHHSLWFAKPKNYCEGLQEDQKIRNFIKNYIKK 171 MGQ NPLGFRLGTTQ HHSLWF++PKNY EGLQED+KIR+ IKNY++K Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFSQPKNYSEGLQEDKKIRDCIKNYVQK 49
BLAST of CK939496 vs. ExPASy Swiss-Prot
Match: RR3_SOLBU (30S ribosomal protein S3, chloroplastic OS=Solanum bulbocastanum GN=rps3 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.831e-17 Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 1 Query: 25 MGQXXNPLGFRLGTTQSHHSLWFAKPKNYCEGLQEDQKIRNFIKNYIKK 171 MGQ NPLGFRLGTTQ HHSLWF++PKNY EGLQED+KIR+ IKNY++K Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFSQPKNYSEGLQEDKKIRDCIKNYVQK 49
BLAST of CK939496 vs. ExPASy Swiss-Prot
Match: RR3_PLAOC (30S ribosomal protein S3, chloroplastic OS=Platanus occidentalis GN=rps3 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.831e-17 Identity = 38/49 (77.55%), Postives = 45/49 (91.84%), Query Frame = 1 Query: 25 MGQXXNPLGFRLGTTQSHHSLWFAKPKNYCEGLQEDQKIRNFIKNYIKK 171 MGQ NPLGFRLGTTQ+HHS+WFA+PK+Y EGLQEDQKIR+ IKNY++K Sbjct: 1 MGQKINPLGFRLGTTQNHHSVWFAQPKSYSEGLQEDQKIRDCIKNYVQK 49
BLAST of CK939496 vs. ExPASy Swiss-Prot
Match: RR3_MORIN (30S ribosomal protein S3, chloroplastic OS=Morus indica GN=rps3 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.831e-17 Identity = 40/49 (81.63%), Postives = 42/49 (85.71%), Query Frame = 1 Query: 25 MGQXXNPLGFRLGTTQSHHSLWFAKPKNYCEGLQEDQKIRNFIKNYIKK 171 MGQ NPLGFRLG TQ HHSLWFA+PKNY E LQEDQKIR+ IKNYIKK Sbjct: 1 MGQKINPLGFRLGATQGHHSLWFAQPKNYSEDLQEDQKIRDCIKNYIKK 49
BLAST of CK939496 vs. ExPASy Swiss-Prot
Match: RR3_LOLPR (30S ribosomal protein S3, chloroplastic OS=Lolium perenne GN=rps3 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.831e-17 Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 1 Query: 25 MGQXXNPLGFRLGTTQSHHSLWFAKPKNYCEGLQEDQKIRNFIKNYIKK 171 MGQ NPLGFRLGTTQ HHS WFA+PKNY EGLQED+KIR+ IKNYI+K Sbjct: 1 MGQKINPLGFRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQK 49
BLAST of CK939496 vs. ExPASy Swiss-Prot
Match: RR3_HORVU (30S ribosomal protein S3, chloroplastic OS=Hordeum vulgare GN=rps3 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.831e-17 Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 1 Query: 25 MGQXXNPLGFRLGTTQSHHSLWFAKPKNYCEGLQEDQKIRNFIKNYIKK 171 MGQ NPLGFRLGTTQ HHS WFA+PKNY EGLQED+KIR+ IKNYI+K Sbjct: 1 MGQKINPLGFRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQK 49
BLAST of CK939496 vs. ExPASy Swiss-Prot
Match: RR3_OLIPU (30S ribosomal protein S3, chloroplastic OS=Olimarabidopsis pumila GN=rps3 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.123e-17 Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 1 Query: 25 MGQXXNPLGFRLGTTQSHHSLWFAKPKNYCEGLQEDQKIRNFIKNYIKK 171 MGQ NPLGFRLGTTQSHHSLWFA+PK Y EGL+ED+KIR+ IKNY++K Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQK 49 The following BLAST results are available for this feature:
BLAST of CK939496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939496 ID=CK939496; Name=CK939496; organism=Citrus sinensis; type=EST; length=173bpback to top |