CK939491

Overview
NameCK939491
Unique NameCK939491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939491 vs. ExPASy Swiss-Prot
Match: CH60_SYMTH (60 kDa chaperonin OS=Symbiobacterium thermophilum GN=groL PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.249e-50
Identity = 105/172 (61.05%), Postives = 130/172 (75.58%), Query Frame = 2
Query:  245 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDG 757
            +AK I FD+ +R  +QAG+D L++ V +TLGPRGRNVVLD+ FG+P V NDGVTIAR IEL DP EN GA L++EVA+KTND AGDGTTT++VLA+ I+K GL +VT GANP+ LKRGI+K V   VEEL K+A P+E    I  VA ISA ND  IG ++A A+D VG DG
Sbjct:    2 TAKQIIFDEAARRKLQAGVDALANTVKVTLGPRGRNVVLDKKFGAPAVANDGVTIAREIELEDPFENMGAQLVKEVATKTNDVAGDGTTTSTVLAQAIVKEGLKNVTGGANPMILKRGIEKAVQVAVEELRKQAIPVETNKAIAEVAAISANNDREIGELVAKAMDTVGKDG 173          
BLAST of CK939491 vs. ExPASy Swiss-Prot
Match: CH60_THEEB (60 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groL PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.631e-50
Identity = 100/171 (58.48%), Postives = 136/171 (79.53%), Query Frame = 2
Query:  248 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDG 757
            AK I +++ +R A++ G+D L+++V +TLGP+GRNVVL++ FG+P++VNDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GANP++LKRGIDK    LVE++ + ARP+E    I  VA ISAGND+ +G MIADA+DKVG +G
Sbjct:    2 AKRIIYNENARRALEKGMDILAESVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKEGLRNVAAGANPIALKRGIDKATQFLVEKIAEHARPVEDSKAIAQVAAISAGNDEEVGRMIADAMDKVGKEG 172          
BLAST of CK939491 vs. ExPASy Swiss-Prot
Match: CH601_THEVL (60 kDa chaperonin 1 OS=Thermosynechococcus vulcanus GN=groL1 PE=3 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.631e-50
Identity = 100/171 (58.48%), Postives = 136/171 (79.53%), Query Frame = 2
Query:  248 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDG 757
            AK I +++ +R A++ G+D L+++V +TLGP+GRNVVL++ FG+P++VNDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GANP++LKRGIDK    LVE++ + ARP+E    I  VA ISAGND+ +G MIADA+DKVG +G
Sbjct:    2 AKRIIYNENARRALEKGMDILAESVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKEGLRNVAAGANPIALKRGIDKATQFLVEKIAEHARPVEDSKAIAQVAAISAGNDEEVGRMIADAMDKVGKEG 172          
BLAST of CK939491 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.130e-50
Identity = 100/171 (58.48%), Postives = 136/171 (79.53%), Query Frame = 2
Query:  248 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDG 757
            AK I+FD+ SR A++ G++ L+DAV +TLGP+GRNV+L++ +G+P++VNDG+T+A+ IEL DP+EN GA LI+EVASKT D AGDGTTTA+VL + +I+ GL +V +G NPVSLKRGIDKT   LV E+ K A+P+EG   I  VAT+S+GND+ +G MIA A++KV  DG
Sbjct:    2 AKIISFDEESRRALERGVNALADAVKITLGPKGRNVLLEKKYGTPQIVNDGITVAKEIELEDPLENTGARLIQEVASKTKDVAGDGTTTATVLVQALIREGLKNVAAGTNPVSLKRGIDKTTEALVAEIAKVAKPVEG-SAIAQVATVSSGNDEEVGAMIAQAVEKVTKDG 171          
BLAST of CK939491 vs. ExPASy Swiss-Prot
Match: CH602_SYNJA (60 kDa chaperonin 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL2 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.782e-50
Identity = 100/171 (58.48%), Postives = 136/171 (79.53%), Query Frame = 2
Query:  248 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDG 757
            AK I F + +R A++ G+D L++AV +TLGP+GRNVVL++ FG+P++VNDGVTIA+ IEL D +EN G +LIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GANP++LKRGIDK V  LV+++ + ARP+E    I  VA ISAGND+ +G MIA+A+DKVG +G
Sbjct:    2 AKSIIFSEEARRALEHGMDILAEAVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDHIENTGVSLIRQAASKTNDTAGDGTTTATVLAHAMVKEGLKNVAAGANPIALKRGIDKAVKFLVDKIAEHARPVEDSKAIAQVAAISAGNDEEVGRMIAEAMDKVGREG 172          
BLAST of CK939491 vs. ExPASy Swiss-Prot
Match: CH601_SYNJB (60 kDa chaperonin 1 OS=Synechococcus sp. GN=groL1 PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.633e-50
Identity = 99/171 (57.89%), Postives = 136/171 (79.53%), Query Frame = 2
Query:  248 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDG 757
            AK I F + +R A++ G+D L++AV +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL D +EN G +LIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GANP++LKRGIDK V  LV+++ + ARP+E    I  VA ISAGND+ +G MIA+A+DKVG +G
Sbjct:    2 AKSIIFSEEARRALEHGMDILAEAVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVSLIRQAASKTNDTAGDGTTTATVLAHAMVKEGLKNVAAGANPIALKRGIDKAVKFLVDKIAEHARPVEDSKAIAQVAAISAGNDEEVGRMIAEAMDKVGREG 172          
BLAST of CK939491 vs. ExPASy Swiss-Prot
Match: CH60_CHLT3 (60 kDa chaperonin OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.745e-50
Identity = 100/172 (58.14%), Postives = 134/172 (77.91%), Query Frame = 2
Query:  245 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDG 757
            +AK+I FD   R A++ G+DKL+DAV +TLGP GRNV++D+ FG+P V  DGVT+A+ +EL DP+EN GA ++REVASKT+D AGDGTTTA+VLA+ I + GL +VT+GANP+ LKRGIDK V G++ EL+K +RPI  + +I  V  ISA ND  IG +IA+A++KVG DG
Sbjct:    2 AAKEIHFDAEGRNALKRGVDKLADAVKVTLGPAGRNVIIDKKFGAPTVTKDGVTVAKEVELEDPVENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVTAGANPMDLKRGIDKAVTGVIIELKKISRPIADKKEIAQVGCISANNDSEIGDLIAEAMEKVGKDG 173          
BLAST of CK939491 vs. ExPASy Swiss-Prot
Match: CH60_DESHD (60 kDa chaperonin OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=groL PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 8.094e-50
Identity = 99/171 (57.89%), Postives = 137/171 (80.12%), Query Frame = 2
Query:  248 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDG 757
            AK I F++ +R A++ G++ L+++V +TLGP+GRNVVLD+ FG+P + NDGVTIAR IEL DP EN GA L++EVA+KTND AGDGTTTA+VLA+ II+ GL +V +GANP+ +KRGI+K V  +VE+++  A+PIE ++ I  VA+ISAG DD IG +I+DA++KVG DG
Sbjct:    2 AKQIVFNEEARRALERGVNALAESVRVTLGPKGRNVVLDKKFGAPLITNDGVTIAREIELEDPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVAAGANPMGIKRGIEKAVESVVEDIKTNAKPIESKESIAQVASISAG-DDNIGVLISDAMEKVGKDG 171          
BLAST of CK939491 vs. ExPASy Swiss-Prot
Match: CH60_GEMAT (60 kDa chaperonin OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=groL PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.057e-49
Identity = 97/172 (56.40%), Postives = 140/172 (81.40%), Query Frame = 2
Query:  245 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDG 757
            +AK++ F+  +RAA++ G+D+L++AV +TLGP+GRNVV+D+ FG+P V  DGVT+A+ IELADP+EN GA +++EVA+KT+D AGDGTTTA+VLA+ I + GL +VT+G+NP++LKRGI+K V G+VEEL++ + P  G+ +I  V TISA ND  IG +IA+A++KVG DG
Sbjct:    2 AAKELHFNVDARAALKRGVDQLAEAVKVTLGPKGRNVVIDKKFGAPTVTKDGVTVAKEIELADPIENMGAQMVKEVATKTSDLAGDGTTTATVLAQAIFREGLKNVTAGSNPMALKRGIEKAVAGIVEELKRISVPTTGKKEIAQVGTISANNDPEIGNLIAEAMEKVGKDG 173          
BLAST of CK939491 vs. ExPASy Swiss-Prot
Match: CH601_ANAVT (60 kDa chaperonin 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL1 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.057e-49
Identity = 100/171 (58.48%), Postives = 134/171 (78.36%), Query Frame = 2
Query:  248 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDG 757
            AK I +++ +R A++ GID L++AV +TLGP+GRNVVL++ FG+P++VNDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA  I+K GL +V +GAN + LKRGIDK    LV+ +++ ARP+E    I  V +ISAGNDD +G MIA+A+DKVG +G
Sbjct:    2 AKRIIYNENARRALERGIDILAEAVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAIVKEGLRNVAAGANAILLKRGIDKATGFLVDRIKEHARPVEDSKSIAQVGSISAGNDDEVGQMIAEAMDKVGKEG 172          
The following BLAST results are available for this feature:
BLAST of CK939491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_SYMTH1.249e-5061.0560 kDa chaperonin OS=Symbiobacterium thermophilum ... [more]
CH60_THEEB1.631e-5058.4860 kDa chaperonin OS=Thermosynechococcus elongatus... [more]
CH601_THEVL1.631e-5058.4860 kDa chaperonin 1 OS=Thermosynechococcus vulcanu... [more]
CH602_ANASP2.130e-5058.4860 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 71... [more]
CH602_SYNJA2.782e-5058.4860 kDa chaperonin 2 OS=Synechococcus sp. (strain J... [more]
CH601_SYNJB3.633e-5057.8960 kDa chaperonin 1 OS=Synechococcus sp. GN=groL1 ... [more]
CH60_CHLT34.745e-5058.1460 kDa chaperonin OS=Chloroherpeton thalassium (st... [more]
CH60_DESHD8.094e-5057.8960 kDa chaperonin OS=Desulfitobacterium hafniense ... [more]
CH60_GEMAT1.057e-4956.4060 kDa chaperonin OS=Gemmatimonas aurantiaca (stra... [more]
CH601_ANAVT1.057e-4958.4860 kDa chaperonin 1 OS=Anabaena variabilis (strain... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004749_G11 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939491 ID=CK939491; Name=CK939491; organism=Citrus sinensis; type=EST; length=759bp
GGGGATAGCTAAACCCTAAGCTCCCCAAGTCCTCTCGCAGCTTCTACTTG
TTGTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACGCTTTACTCCG
TTTGGTTGATTGTTCGAAATGGCTTCTGTTAACGCCCTTTCTTCGGCTTC
CATTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGA
ATCAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCC
AAAGATATTGCTTTTGACCAGATCTCCAGGGCCGCAATGCAGGCCGGCAT
CGATAAGCTTTCCGATGCTGTTGGCCTTACTCTGGGTCCAAGAGGGAGAA
ATGTTGTTCTGGATGAATTTGGAAGTCCGAAAGTGGTTAATGATGGAGTA
ACAATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGC
TGCTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATG
GAACAACAACTGCATCAGTTCTTGCGCGAGAAATAATTAAACTAGGACTC
CTGAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGA
TAAAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTA
TCGAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAAT
GATGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTCGGTCC
TGATGGCGT
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